Fix lints

Add changelog
Remove deprecated LoggingContext methods
2025-12-07 01:20:16 +00:00 · 2025-09-29 14:06:00 -05:00 · 2025-09-29 13:48:33 -05:00 · 2025-09-29 13:41:28 -05:00 · 2025-09-29 17:08:56 +01:00 · 2025-09-29 17:07:22 +01:00
436 changed files with 6021 additions and 1661 deletions
--- a/.ci/scripts/triage_labelled_issue.sh
+++ b/.ci/scripts/triage_labelled_issue.sh
@@ -0,0 +1,29 @@
+#!/usr/bin/env bash
+set -euo pipefail
+
+# 1) Resolve project ID.
+PROJECT_ID=$(gh project view "$PROJECT_NUMBER" --owner "$PROJECT_OWNER" --format json | jq -r '.id')
+
+# 2) Find existing item (project card) for this issue.
+ITEM_ID=$(
+  gh project item-list "$PROJECT_NUMBER" --owner "$PROJECT_OWNER" --format json \
+  | jq -r --arg url "$ISSUE_URL" '.items[] | select(.content.url==$url) | .id' | head -n1
+)
+
+# 3) If one doesn't exist, add this issue to the project.
+if [ -z "${ITEM_ID:-}" ]; then
+  ITEM_ID=$(gh project item-add "$PROJECT_NUMBER" --owner "$PROJECT_OWNER" --url "$ISSUE_URL" --format json | jq -r '.id')
+fi
+
+# 4) Get Status field id + the option id for TARGET_STATUS.
+FIELDS_JSON=$(gh project field-list "$PROJECT_NUMBER" --owner "$PROJECT_OWNER" --format json)
+STATUS_FIELD=$(echo "$FIELDS_JSON" | jq -r '.fields[] | select(.name=="Status")')
+STATUS_FIELD_ID=$(echo "$STATUS_FIELD" | jq -r '.id')
+OPTION_ID=$(echo "$STATUS_FIELD" | jq -r --arg name "$TARGET_STATUS" '.options[] | select(.name==$name) | .id')
+
+if [ -z "${OPTION_ID:-}" ]; then
+  echo "No Status option named \"$TARGET_STATUS\" found"; exit 1
+fi
+
+# 5) Set Status (moves item to the matching column in the board view).
+gh project item-edit --id "$ITEM_ID" --project-id "$PROJECT_ID" --field-id "$STATUS_FIELD_ID" --single-select-option-id "$OPTION_ID"
--- a/.github/workflows/docker.yml
+++ b/.github/workflows/docker.yml
@@ -41,13 +41,13 @@ jobs:
          echo "SYNAPSE_VERSION=$(grep "^version" pyproject.toml | sed -E 's/version\s*=\s*["]([^"]*)["]/\1/')" >> $GITHUB_ENV

      - name: Log in to DockerHub
-        uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
+        uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
        with:
          username: ${{ secrets.DOCKERHUB_USERNAME }}
          password: ${{ secrets.DOCKERHUB_TOKEN }}

      - name: Log in to GHCR
-        uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
+        uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
        with:
          registry: ghcr.io
          username: ${{ github.repository_owner }}
@@ -102,14 +102,14 @@ jobs:
          merge-multiple: true

      - name: Log in to DockerHub
-        uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
+        uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
        if: ${{ startsWith(matrix.repository, 'docker.io') }}
        with:
          username: ${{ secrets.DOCKERHUB_USERNAME }}
          password: ${{ secrets.DOCKERHUB_TOKEN }}

      - name: Log in to GHCR
-        uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
+        uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
        if: ${{ startsWith(matrix.repository, 'ghcr.io') }}
        with:
          registry: ghcr.io
@@ -120,7 +120,7 @@ jobs:
        uses: docker/setup-buildx-action@e468171a9de216ec08956ac3ada2f0791b6bd435 # v3.11.1

      - name: Install Cosign
-        uses: sigstore/cosign-installer@d58896d6a1865668819e1d91763c7751a165e159 # v3.9.2
+        uses: sigstore/cosign-installer@d7543c93d881b35a8faa02e8e3605f69b7a1ce62 # v3.10.0

      - name: Calculate docker image tag
        uses: docker/metadata-action@c1e51972afc2121e065aed6d45c65596fe445f3f # v5.8.0
--- a/.github/workflows/docs-pr.yaml
+++ b/.github/workflows/docs-pr.yaml
@@ -24,7 +24,7 @@ jobs:
          mdbook-version: '0.4.17'

      - name: Setup python
-        uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+        uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"

--- a/.github/workflows/docs.yaml
+++ b/.github/workflows/docs.yaml
@@ -64,7 +64,7 @@ jobs:
        run: echo 'window.SYNAPSE_VERSION = "${{ needs.pre.outputs.branch-version }}";' > ./docs/website_files/version.js

      - name: Setup python
-        uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+        uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"

--- a/.github/workflows/fix_lint.yaml
+++ b/.github/workflows/fix_lint.yaml
@@ -25,7 +25,7 @@ jobs:
        with:
          toolchain: ${{ env.RUST_VERSION }}
          components: clippy, rustfmt
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Setup Poetry
        uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
--- a/.github/workflows/latest_deps.yml
+++ b/.github/workflows/latest_deps.yml
@@ -47,7 +47,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      # The dev dependencies aren't exposed in the wheel metadata (at least with current
      # poetry-core versions), so we install with poetry.
@@ -83,7 +83,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: sudo apt-get -qq install xmlsec1
      - name: Set up PostgreSQL ${{ matrix.postgres-version }}
@@ -93,7 +93,7 @@ jobs:
            -e POSTGRES_PASSWORD=postgres \
            -e POSTGRES_INITDB_ARGS="--lc-collate C --lc-ctype C --encoding UTF8" \
            postgres:${{ matrix.postgres-version }}
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - run: pip install .[all,test]
@@ -158,7 +158,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Ensure sytest runs `pip install`
        # Delete the lockfile so sytest will `pip install` rather than `poetry install`
@@ -209,7 +209,7 @@ jobs:
      - name: Prepare Complement's Prerequisites
        run: synapse/.ci/scripts/setup_complement_prerequisites.sh

-      - uses: actions/setup-go@d35c59abb061a4a6fb18e82ac0862c26744d6ab5 # v5.5.0
+      - uses: actions/setup-go@44694675825211faa026b3c33043df3e48a5fa00 # v6.0.0
        with:
          cache-dependency-path: complement/go.sum
          go-version-file: complement/go.mod
--- a/.github/workflows/poetry_lockfile.yaml
+++ b/.github/workflows/poetry_lockfile.yaml
@@ -17,7 +17,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: '3.x'
      - run: pip install tomli
--- a/.github/workflows/push_complement_image.yml
+++ b/.github/workflows/push_complement_image.yml
@@ -48,7 +48,7 @@ jobs:
        with:
          ref: master
      - name: Login to registry
-        uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
+        uses: docker/login-action@5e57cd118135c172c3672efd75eb46360885c0ef # v3.6.0
        with:
          registry: ghcr.io
          username: ${{ github.actor }}
--- a/.github/workflows/release-artifacts.yml
+++ b/.github/workflows/release-artifacts.yml
@@ -28,7 +28,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - id: set-distros
@@ -66,7 +66,7 @@ jobs:
          install: true

      - name: Set up docker layer caching
-        uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
+        uses: actions/cache@0057852bfaa89a56745cba8c7296529d2fc39830 # v4.3.0
        with:
          path: /tmp/.buildx-cache
          key: ${{ runner.os }}-buildx-${{ github.sha }}
@@ -74,7 +74,7 @@ jobs:
            ${{ runner.os }}-buildx-

      - name: Set up python
-        uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+        uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"

@@ -134,7 +134,7 @@ jobs:
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0

-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          # setup-python@v4 doesn't impose a default python version. Need to use 3.x
          # here, because `python` on osx points to Python 2.7.
@@ -166,7 +166,7 @@ jobs:

    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.10"

--- a/.github/workflows/schema.yaml
+++ b/.github/workflows/schema.yaml
@@ -15,7 +15,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - name: Install check-jsonschema
@@ -41,7 +41,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - name: Install PyYAML
--- a/.github/workflows/tests.yml
+++ b/.github/workflows/tests.yml
@@ -91,7 +91,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1
      - uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
        with:
          python-version: "3.x"
@@ -107,7 +107,7 @@ jobs:

    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - run: "pip install 'click==8.1.1' 'GitPython>=3.1.20'"
@@ -117,7 +117,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - run: .ci/scripts/check_lockfile.py
@@ -157,7 +157,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Setup Poetry
        uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
@@ -174,7 +174,7 @@ jobs:
      # Cribbed from
      # https://github.com/AustinScola/mypy-cache-github-action/blob/85ea4f2972abed39b33bd02c36e341b28ca59213/src/restore.ts#L10-L17
      - name: Restore/persist mypy's cache
-        uses: actions/cache@0400d5f644dc74513175e3cd8d07132dd4860809 # v4.2.4
+        uses: actions/cache@0057852bfaa89a56745cba8c7296529d2fc39830 # v4.3.0
        with:
          path: |
            .mypy_cache
@@ -199,7 +199,7 @@ jobs:
        with:
          ref: ${{ github.event.pull_request.head.sha }}
          fetch-depth: 0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - run: "pip install 'towncrier>=18.6.0rc1'"
@@ -220,7 +220,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1
      - uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
        with:
          poetry-version: "2.1.1"
@@ -240,7 +240,7 @@ jobs:
        with:
            components: clippy
            toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: cargo clippy -- -D warnings

@@ -259,7 +259,7 @@ jobs:
        with:
            toolchain: nightly-2025-04-23
            components: clippy
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: cargo clippy --all-features -- -D warnings

@@ -276,7 +276,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Setup Poetry
        uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
@@ -315,7 +315,7 @@ jobs:
          # `.rustfmt.toml`.
          toolchain: nightly-2025-04-23
          components: rustfmt
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: cargo fmt --check

@@ -327,7 +327,7 @@ jobs:
    if: ${{ needs.changes.outputs.linting_readme == 'true' }}
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - run: "pip install rstcheck"
@@ -377,7 +377,7 @@ jobs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: "3.x"
      - id: get-matrix
@@ -415,7 +415,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
        with:
@@ -459,7 +459,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      # There aren't wheels for some of the older deps, so we need to install
      # their build dependencies
@@ -468,7 +468,7 @@ jobs:
          sudo apt-get -qq install build-essential libffi-dev python3-dev \
            libxml2-dev libxslt-dev xmlsec1 zlib1g-dev libjpeg-dev libwebp-dev

-      - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5.6.0
+      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
        with:
          python-version: '3.9'

@@ -576,7 +576,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Run SyTest
        run: /bootstrap.sh synapse
@@ -722,12 +722,12 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Prepare Complement's Prerequisites
        run: synapse/.ci/scripts/setup_complement_prerequisites.sh

-      - uses: actions/setup-go@d35c59abb061a4a6fb18e82ac0862c26744d6ab5 # v5.5.0
+      - uses: actions/setup-go@44694675825211faa026b3c33043df3e48a5fa00 # v6.0.0
        with:
          cache-dependency-path: complement/go.sum
          go-version-file: complement/go.mod
@@ -756,7 +756,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: cargo test

@@ -776,7 +776,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
            toolchain: nightly-2022-12-01
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - run: cargo bench --no-run

--- a/.github/workflows/triage_labelled.yml
+++ b/.github/workflows/triage_labelled.yml
@@ -6,43 +6,26 @@ on:

 jobs:
  move_needs_info:
-    name: Move X-Needs-Info on the triage board
    runs-on: ubuntu-latest
    if: >
      contains(github.event.issue.labels.*.name, 'X-Needs-Info')
+    permissions:
+      contents: read
+    env:
+      # This token must have the following scopes: ["repo:public_repo", "admin:org->read:org", "user->read:user", "project"]
+      GITHUB_TOKEN: ${{ secrets.ELEMENT_BOT_TOKEN }}
+      PROJECT_OWNER: matrix-org
+      # Backend issue triage board.
+      # https://github.com/orgs/matrix-org/projects/67/views/1
+      PROJECT_NUMBER: 67
+      ISSUE_URL: ${{ github.event.issue.html_url }}
+      # This field is case-sensitive.
+      TARGET_STATUS: Needs info
    steps:
-      - uses: actions/add-to-project@4515659e2b458b27365e167605ac44f219494b66 # v1.0.2
-        id: add_project
+      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
        with:
-          project-url: "https://github.com/orgs/matrix-org/projects/67"
-          github-token: ${{ secrets.ELEMENT_BOT_TOKEN }}
-        # This action will error if the issue already exists on the project. Which is
-        # common as `X-Needs-Info` will often be added to issues that are already in
-        # the triage queue. Prevent the whole job from failing in this case.
-        continue-on-error: true
-      - name: Set status
-        env:
-          GITHUB_TOKEN: ${{ secrets.ELEMENT_BOT_TOKEN }}
-        run: |
-          gh api graphql -f query='
-          mutation(
-              $project: ID!
-              $item: ID!
-              $fieldid: ID!
-              $columnid: String!
-            )  {
-            updateProjectV2ItemFieldValue(
-              input: {
-               projectId: $project
-                itemId: $item
-                fieldId: $fieldid
-                value: { 
-                  singleSelectOptionId: $columnid
-                  }
-              }
-            ) {
-              projectV2Item {
-                id
-              }
-            }
-          }' -f project="PVT_kwDOAIB0Bs4AFDdZ" -f item=${{ steps.add_project.outputs.itemId }} -f fieldid="PVTSSF_lADOAIB0Bs4AFDdZzgC6ZA4" -f columnid=ba22e43c --silent
+          # Only clone the script file we care about, instead of the whole repo.
+          sparse-checkout: .ci/scripts/triage_labelled_issue.sh
+
+      - name: Ensure issue exists on the board, then set Status
+        run: .ci/scripts/triage_labelled_issue.sh
--- a/.github/workflows/twisted_trunk.yml
+++ b/.github/workflows/twisted_trunk.yml
@@ -49,7 +49,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
        with:
@@ -77,7 +77,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - uses: matrix-org/setup-python-poetry@5bbf6603c5c930615ec8a29f1b5d7d258d905aa4 # v2.0.0
        with:
@@ -123,7 +123,7 @@ jobs:
        uses: dtolnay/rust-toolchain@e97e2d8cc328f1b50210efc529dca0028893a2d9 # master
        with:
          toolchain: ${{ env.RUST_VERSION }}
-      - uses: Swatinem/rust-cache@98c8021b550208e191a6a3145459bfc9fb29c4c0 # v2.8.0
+      - uses: Swatinem/rust-cache@f13886b937689c021905a6b90929199931d60db1 # v2.8.1

      - name: Patch dependencies
        # Note: The poetry commands want to create a virtualenv in /src/.venv/,
@@ -182,7 +182,7 @@ jobs:
      - name: Prepare Complement's Prerequisites
        run: synapse/.ci/scripts/setup_complement_prerequisites.sh

-      - uses: actions/setup-go@d35c59abb061a4a6fb18e82ac0862c26744d6ab5 # v5.5.0
+      - uses: actions/setup-go@44694675825211faa026b3c33043df3e48a5fa00 # v6.0.0
        with:
          cache-dependency-path: complement/go.sum
          go-version-file: complement/go.mod
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,3 +1,104 @@
+# Synapse 1.139.0rc3 (2025-09-25)
+
+## Bugfixes
+
+- Fix a bug introduced in 1.139.0rc1 where `run_coroutine_in_background(...)` incorrectly handled logcontexts, resulting in partially broken logging. ([\#18964](https://github.com/element-hq/synapse/issues/18964))
+
+
+
+
+# Synapse 1.139.0rc2 (2025-09-23)
+
+## Internal Changes
+
+- Drop support for Ubuntu 24.10 Oracular Oriole, and add support for Ubuntu 25.04 Plucky Puffin. This change was applied on top of 1.139.0rc1. ([\#18962](https://github.com/element-hq/synapse/issues/18962))
+
+
+
+# Synapse 1.139.0rc1 (2025-09-23)
+
+## Features
+
+- Add experimental support for [MSC4308: Thread Subscriptions extension to Sliding Sync](https://github.com/matrix-org/matrix-spec-proposals/pull/4308) when [MSC4306: Thread Subscriptions](https://github.com/matrix-org/matrix-spec-proposals/pull/4306) and [MSC4186: Simplified Sliding Sync](https://github.com/matrix-org/matrix-spec-proposals/pull/4186) are enabled. ([\#18695](https://github.com/element-hq/synapse/issues/18695))
+- Update push rules for experimental [MSC4306: Thread Subscriptions](https://github.com/matrix-org/matrix-doc/issues/4306) to follow a newer draft. ([\#18846](https://github.com/element-hq/synapse/issues/18846))
+- Add `get_media_upload_limits_for_user` and `on_media_upload_limit_exceeded` module API callbacks to the media repository. ([\#18848](https://github.com/element-hq/synapse/issues/18848))
+- Support [MSC4169](https://github.com/matrix-org/matrix-spec-proposals/pull/4169) for backwards-compatible redaction sending using the `/send` endpoint. Contributed by @SpiritCroc @ Beeper. ([\#18898](https://github.com/element-hq/synapse/issues/18898))
+- Add an in-memory cache to `_get_e2e_cross_signing_signatures_for_devices` to reduce DB load. ([\#18899](https://github.com/element-hq/synapse/issues/18899))
+- Update [MSC4190](https://github.com/matrix-org/matrix-spec-proposals/pull/4190) support to return correct errors and allow appservices to reset cross-signing keys without user-interactive authentication. Contributed by @tulir @ Beeper. ([\#18946](https://github.com/element-hq/synapse/issues/18946))
+
+## Bugfixes
+
+- Ensure all PDUs sent via `/send` pass canonical JSON checks. ([\#18641](https://github.com/element-hq/synapse/issues/18641))
+- Fix bug where we did not send invite revocations over federation. ([\#18823](https://github.com/element-hq/synapse/issues/18823))
+- Fix prefixed support for [MSC4133](https://github.com/matrix-org/matrix-spec-proposals/pull/4133). ([\#18875](https://github.com/element-hq/synapse/issues/18875))
+- Fix open redirect in legacy SSO flow with the `idp` query parameter. ([\#18909](https://github.com/element-hq/synapse/issues/18909))
+- Fix a performance regression related to the experimental Delayed Events ([MSC4140](https://github.com/matrix-org/matrix-spec-proposals/pull/4140)) feature. ([\#18926](https://github.com/element-hq/synapse/issues/18926))
+
+## Updates to the Docker image
+
+- Suppress "Applying schema" log noise bulk when `SYNAPSE_LOG_TESTING` is set. ([\#18878](https://github.com/element-hq/synapse/issues/18878))
+
+## Improved Documentation
+
+- Clarify Python dependency constraints in our deprecation policy. ([\#18856](https://github.com/element-hq/synapse/issues/18856))
+- Clarify necessary `jwt_config` parameter in OIDC documentation for authentik. Contributed by @maxkratz. ([\#18931](https://github.com/element-hq/synapse/issues/18931))
+
+## Deprecations and Removals
+
+- Remove obsolete and experimental `/sync/e2ee` endpoint. ([\#18583](https://github.com/element-hq/synapse/issues/18583))
+
+## Internal Changes
+
+- Fix `LaterGauge` metrics to collect from all servers. ([\#18791](https://github.com/element-hq/synapse/issues/18791))
+- Configure Synapse to run [MSC4306: Thread Subscriptions](https://github.com/matrix-org/matrix-spec-proposals/pull/4306) Complement tests. ([\#18819](https://github.com/element-hq/synapse/issues/18819))
+- Remove `sentinel` logcontext usage where we log in `setup`, `start` and `exit`. ([\#18870](https://github.com/element-hq/synapse/issues/18870))
+- Use the `Enum`'s value for the dictionary key when responding to an admin request for experimental features. ([\#18874](https://github.com/element-hq/synapse/issues/18874))
+- Start background tasks after we fork the process (daemonize). ([\#18886](https://github.com/element-hq/synapse/issues/18886))
+- Better explain how we manage the logcontext in `run_in_background(...)` and `run_as_background_process(...)`. ([\#18900](https://github.com/element-hq/synapse/issues/18900), [\#18906](https://github.com/element-hq/synapse/issues/18906))
+- Remove `sentinel` logcontext usage in `Clock` utilities like `looping_call` and `call_later`. ([\#18907](https://github.com/element-hq/synapse/issues/18907))
+- Replace usages of the deprecated `pkg_resources` interface in preparation of setuptools dropping it soon. ([\#18910](https://github.com/element-hq/synapse/issues/18910))
+- Split loading config from homeserver `setup`. ([\#18933](https://github.com/element-hq/synapse/issues/18933))
+- Fix `run_in_background` not being awaited properly in some tests causing `LoggingContext` problems. ([\#18937](https://github.com/element-hq/synapse/issues/18937))
+- Fix `run_as_background_process` not being awaited properly causing `LoggingContext` problems in experimental [MSC4140](https://github.com/matrix-org/matrix-spec-proposals/pull/4140): Delayed events implementation. ([\#18938](https://github.com/element-hq/synapse/issues/18938))
+- Introduce `Clock.call_when_running(...)` to wrap startup code in a logcontext, ensuring we can identify which server generated the logs. ([\#18944](https://github.com/element-hq/synapse/issues/18944))
+- Introduce `Clock.add_system_event_trigger(...)` to wrap system event callback code in a logcontext, ensuring we can identify which server generated the logs. ([\#18945](https://github.com/element-hq/synapse/issues/18945))
+
+
+
+### Updates to locked dependencies
+
+* Bump actions/setup-go from 5.5.0 to 6.0.0. ([\#18891](https://github.com/element-hq/synapse/issues/18891))
+* Bump actions/setup-python from 5.6.0 to 6.0.0. ([\#18890](https://github.com/element-hq/synapse/issues/18890))
+* Bump authlib from 1.6.1 to 1.6.3. ([\#18921](https://github.com/element-hq/synapse/issues/18921))
+* Bump jsonschema from 4.25.0 to 4.25.1. ([\#18897](https://github.com/element-hq/synapse/issues/18897))
+* Bump log from 0.4.27 to 0.4.28. ([\#18892](https://github.com/element-hq/synapse/issues/18892))
+* Bump phonenumbers from 9.0.12 to 9.0.13. ([\#18893](https://github.com/element-hq/synapse/issues/18893))
+* Bump pydantic from 2.11.7 to 2.11.9. ([\#18922](https://github.com/element-hq/synapse/issues/18922))
+* Bump serde from 1.0.219 to 1.0.223. ([\#18920](https://github.com/element-hq/synapse/issues/18920))
+* Bump serde_json from 1.0.143 to 1.0.145. ([\#18919](https://github.com/element-hq/synapse/issues/18919))
+* Bump sigstore/cosign-installer from 3.9.2 to 3.10.0. ([\#18917](https://github.com/element-hq/synapse/issues/18917))
+* Bump towncrier from 24.8.0 to 25.8.0. ([\#18894](https://github.com/element-hq/synapse/issues/18894))
+* Bump types-psycopg2 from 2.9.21.20250809 to 2.9.21.20250915. ([\#18918](https://github.com/element-hq/synapse/issues/18918))
+* Bump types-requests from 2.32.4.20250611 to 2.32.4.20250809. ([\#18895](https://github.com/element-hq/synapse/issues/18895))
+* Bump types-setuptools from 80.9.0.20250809 to 80.9.0.20250822. ([\#18924](https://github.com/element-hq/synapse/issues/18924))
+
+# Synapse 1.138.2 (2025-09-24)
+
+## Internal Changes
+
+- Drop support for Ubuntu 24.10 Oracular Oriole, and add support for Ubuntu 25.04 Plucky Puffin. This change was applied on top of 1.138.1. ([\#18962](https://github.com/element-hq/synapse/issues/18962))
+
+
+
+# Synapse 1.138.1 (2025-09-24)
+
+## Bugfixes
+
+- Fix a performance regression related to the experimental Delayed Events ([MSC4140](https://github.com/matrix-org/matrix-spec-proposals/pull/4140)) feature. ([\#18926](https://github.com/element-hq/synapse/issues/18926))
+
+
+
+
 # Synapse 1.138.0 (2025-09-09)

 No significant changes since 1.138.0rc1.
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -28,9 +28,9 @@ dependencies = [

 [[package]]
 name = "anyhow"
-version = "1.0.99"
+version = "1.0.100"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b0674a1ddeecb70197781e945de4b3b8ffb61fa939a5597bcf48503737663100"
+checksum = "a23eb6b1614318a8071c9b2521f36b424b2c83db5eb3a0fead4a6c0809af6e61"

 [[package]]
 name = "arc-swap"
@@ -753,9 +753,9 @@ checksum = "241eaef5fd12c88705a01fc1066c48c4b36e0dd4377dcdc7ec3942cea7a69956"

 [[package]]
 name = "log"
-version = "0.4.27"
+version = "0.4.28"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "13dc2df351e3202783a1fe0d44375f7295ffb4049267b0f3018346dc122a1d94"
+checksum = "34080505efa8e45a4b816c349525ebe327ceaa8559756f0356cba97ef3bf7432"

 [[package]]
 name = "lru-slab"
@@ -1062,9 +1062,9 @@ dependencies = [

 [[package]]
 name = "regex"
-version = "1.11.2"
+version = "1.11.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "23d7fd106d8c02486a8d64e778353d1cffe08ce79ac2e82f540c86d0facf6912"
+checksum = "8b5288124840bee7b386bc413c487869b360b2b4ec421ea56425128692f2a82c"
 dependencies = [
 "aho-corasick",
 "memchr",
@@ -1074,9 +1074,9 @@ dependencies = [

 [[package]]
 name = "regex-automata"
-version = "0.4.9"
+version = "0.4.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "809e8dc61f6de73b46c85f4c96486310fe304c434cfa43669d7b40f711150908"
+checksum = "833eb9ce86d40ef33cb1306d8accf7bc8ec2bfea4355cbdebb3df68b40925cad"
 dependencies = [
 "aho-corasick",
 "memchr",
@@ -1250,18 +1250,28 @@ dependencies = [

 [[package]]
 name = "serde"
-version = "1.0.219"
+version = "1.0.228"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5f0e2c6ed6606019b4e29e69dbaba95b11854410e5347d525002456dbbb786b6"
+checksum = "9a8e94ea7f378bd32cbbd37198a4a91436180c5bb472411e48b5ec2e2124ae9e"
+dependencies = [
+ "serde_core",
+ "serde_derive",
+]
+
+[[package]]
+name = "serde_core"
+version = "1.0.228"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "41d385c7d4ca58e59fc732af25c3983b67ac852c1a25000afe1175de458b67ad"
 dependencies = [
 "serde_derive",
 ]

 [[package]]
 name = "serde_derive"
-version = "1.0.219"
+version = "1.0.228"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5b0276cf7f2c73365f7157c8123c21cd9a50fbbd844757af28ca1f5925fc2a00"
+checksum = "d540f220d3187173da220f885ab66608367b6574e925011a9353e4badda91d79"
 dependencies = [
 "proc-macro2",
 "quote",
@@ -1270,14 +1280,15 @@ dependencies = [

 [[package]]
 name = "serde_json"
-version = "1.0.143"
+version = "1.0.145"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d401abef1d108fbd9cbaebc3e46611f4b1021f714a0597a71f41ee463f5f4a5a"
+checksum = "402a6f66d8c709116cf22f558eab210f5a50187f702eb4d7e5ef38d9a7f1c79c"
 dependencies = [
 "itoa",
 "memchr",
 "ryu",
 "serde",
+ "serde_core",
 ]

 [[package]]
--- a/README.rst
+++ b/README.rst
@@ -265,6 +265,8 @@ This software is dual-licensed by New Vector Ltd (Element). It can be used eithe

 Unless required by applicable law or agreed to in writing, software distributed under the Licenses is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the Licenses for the specific language governing permissions and limitations under the Licenses.

+Please contact `licensing@element.io <mailto:licensing@element.io>`_ to purchase an Element commercial license for this software.
+

 .. |support| image:: https://img.shields.io/badge/matrix-community%20support-success
  :alt: (get community support in #synapse:matrix.org)
--- a/changelog.d/18583.removal
+++ b/changelog.d/18583.removal
@@ -1 +0,0 @@
-Remove obsolete and experimental `/sync/e2ee` endpoint.
--- a/changelog.d/18721.bugfix
+++ b/changelog.d/18721.bugfix
@@ -0,0 +1 @@
+Fix room upgrade `room_config` argument and documentation for `user_may_create_room` spam-checker callback.
--- a/changelog.d/18767.misc
+++ b/changelog.d/18767.misc
@@ -0,0 +1 @@
+Update OEmbed providers to use 'X' instead of 'Twitter' in URL previews, following a rebrand. Contributed by @HammyHavoc.
--- a/changelog.d/18791.misc
+++ b/changelog.d/18791.misc
@@ -1 +0,0 @@
-Fix `LaterGauge` metrics to collect from all servers.
--- a/changelog.d/18819.misc
+++ b/changelog.d/18819.misc
@@ -1 +0,0 @@
-Configure Synapse to run MSC4306: Thread Subscriptions Complement tests.
--- a/changelog.d/18823.bugfix
+++ b/changelog.d/18823.bugfix
@@ -1 +0,0 @@
-Fix bug where we did not send invite revocations over federation.
--- a/changelog.d/18846.feature
+++ b/changelog.d/18846.feature
@@ -1 +0,0 @@
-Update push rules for experimental [MSC4306: Thread Subscriptions](https://github.com/matrix-org/matrix-doc/issues/4306) to follow newer draft.
--- a/changelog.d/18868.misc
+++ b/changelog.d/18868.misc
@@ -0,0 +1 @@
+Fix `server_name` in logging context for multiple Synapse instances in one process.
--- a/changelog.d/18874.misc
+++ b/changelog.d/18874.misc
@@ -1 +0,0 @@
-Use the `Enum`'s value for the dictionary key when responding to an admin request for experimental features.
--- a/changelog.d/18875.bugfix
+++ b/changelog.d/18875.bugfix
@@ -1 +0,0 @@
-Fix prefixed support for MSC4133.
--- a/changelog.d/18878.docker
+++ b/changelog.d/18878.docker
@@ -1 +0,0 @@
-Suppress "Applying schema" log noise bulk when `SYNAPSE_LOG_TESTING` is set.
--- a/changelog.d/18900.misc
+++ b/changelog.d/18900.misc
@@ -1 +0,0 @@
-Better explain how we manage the logcontext in `run_in_background(...)` and `run_as_background_process(...)`.
--- a/changelog.d/18911.feature
+++ b/changelog.d/18911.feature
@@ -0,0 +1,2 @@
+Add an Admin API that allows server admins to to query and investigate the metadata of local or cached remote media via
+the `origin/media_id` identifier found in a [Matrix Content URI](https://spec.matrix.org/v1.14/client-server-api/#matrix-content-mxc-uris).
--- a/changelog.d/18913.misc
+++ b/changelog.d/18913.misc
@@ -0,0 +1 @@
+Fix the GitHub Actions workflow that moves issues labeled "X-Needs-Info" to the "Needs info" column on the team's internal triage board.
--- a/changelog.d/18914.doc
+++ b/changelog.d/18914.doc
@@ -0,0 +1 @@
+Explain how Deferred callbacks interact with logcontexts.
--- a/changelog.d/18932.misc
+++ b/changelog.d/18932.misc
@@ -0,0 +1 @@
+Disconnect background process work from request trace.
--- a/changelog.d/18934.feature
+++ b/changelog.d/18934.feature
@@ -0,0 +1 @@
+Update [MSC4284: Policy Servers](https://github.com/matrix-org/matrix-spec-proposals/pull/4284) implementation to support signatures when available.
--- a/changelog.d/18939.misc
+++ b/changelog.d/18939.misc
@@ -0,0 +1 @@
+Reduce overall number of calls to `_get_e2e_cross_signing_signatures_for_devices` by increasing the batch size of devices the query is called with, reducing DB load.
--- a/changelog.d/18947.misc
+++ b/changelog.d/18947.misc
@@ -0,0 +1 @@
+Update error code used when an appservice tries to masquerade as an unknown device using [MSC4326](https://github.com/matrix-org/matrix-spec-proposals/pull/4326). Contributed by @tulir @ Beeper.
--- a/changelog.d/18948.bugfix
+++ b/changelog.d/18948.bugfix
@@ -0,0 +1 @@
+Compute a user's last seen timestamp from their devices' last seen timestamps instead of IPs, because the latter are automatically cleared according to `user_ips_max_age`.
--- a/changelog.d/18959.misc
+++ b/changelog.d/18959.misc
@@ -0,0 +1 @@
+Fix `no active span when trying to log` tracing error on startup (when OpenTracing is enabled).
--- a/changelog.d/18964.misc
+++ b/changelog.d/18964.misc
@@ -0,0 +1 @@
+Fix `run_coroutine_in_background(...)` incorrectly handling logcontext.
--- a/changelog.d/18971.misc
+++ b/changelog.d/18971.misc
@@ -0,0 +1 @@
+Update dockerfile metadata to fix broken link; point to documentation website.
--- a/changelog.d/18973.misc
+++ b/changelog.d/18973.misc
@@ -0,0 +1 @@
+Note that the code is additionally licensed under the [Element Commercial license](https://github.com/element-hq/synapse/blob/develop/LICENSE-COMMERCIAL) in SPDX expression field configs.
--- a/changelog.d/18974.misc
+++ b/changelog.d/18974.misc
@@ -0,0 +1 @@
+Fix logcontext handling in `timeout_deferred` tests.
--- a/changelog.d/18989.removal
+++ b/changelog.d/18989.removal
@@ -0,0 +1 @@
+Remove deprecated `LoggingContext.set_current_context`/`LoggingContext.current_context` methods which already have equivalent bare methods in `synapse.logging.context`.
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,41 @@
+matrix-synapse-py3 (1.139.0~rc3+nmu1) UNRELEASED; urgency=medium
+
+  * The licensing specifier has been updated to add an optional
+    `LicenseRef-Element-Commercial` license. The code was already licensed in
+    this manner - the debian metadata was just not updated to reflect it.
+
+ -- Synapse Packaging team <packages@matrix.org>  Thu, 25 Sep 2025 12:17:17 +0100
+
+matrix-synapse-py3 (1.139.0~rc3) stable; urgency=medium
+
+  * New Synapse release 1.139.0rc3.
+
+ -- Synapse Packaging team <packages@matrix.org>  Thu, 25 Sep 2025 12:13:23 +0100
+
+matrix-synapse-py3 (1.139.0~rc2) stable; urgency=medium
+
+  * New Synapse release 1.139.0rc2.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 23 Sep 2025 15:31:42 +0100
+
+matrix-synapse-py3 (1.139.0~rc1) stable; urgency=medium
+
+  * New Synapse release 1.139.0rc1.
+
+ -- Synapse Packaging team <packages@matrix.org>  Tue, 23 Sep 2025 13:24:50 +0100
+
+matrix-synapse-py3 (1.138.2) stable; urgency=medium
+
+  * New Synapse release 1.138.2.
+
+ -- Synapse Packaging team <packages@matrix.org>  Wed, 24 Sep 2025 12:26:16 +0100
+
+matrix-synapse-py3 (1.138.1) stable; urgency=medium
+
+  * New Synapse release 1.138.1.
+
+ -- Synapse Packaging team <packages@matrix.org>  Wed, 24 Sep 2025 11:32:38 +0100
+
 matrix-synapse-py3 (1.138.0) stable; urgency=medium

  * New Synapse release 1.138.0.
--- a/debian/copyright
+++ b/debian/copyright
@@ -8,7 +8,7 @@ License: Apache-2.0

 Files: *
 Copyright: 2023 New Vector Ltd
-License: AGPL-3.0-or-later
+License: AGPL-3.0-or-later or LicenseRef-Element-Commercial

 Files: synapse/config/saml2.py
 Copyright: 2015, Ericsson
--- a/docker/Dockerfile
+++ b/docker/Dockerfile
@@ -171,10 +171,10 @@ FROM docker.io/library/python:${PYTHON_VERSION}-slim-${DEBIAN_VERSION}

 ARG TARGETARCH

-LABEL org.opencontainers.image.url='https://matrix.org/docs/projects/server/synapse'
-LABEL org.opencontainers.image.documentation='https://github.com/element-hq/synapse/blob/master/docker/README.md'
+LABEL org.opencontainers.image.url='https://github.com/element-hq/synapse'
+LABEL org.opencontainers.image.documentation='https://element-hq.github.io/synapse/latest/'
 LABEL org.opencontainers.image.source='https://github.com/element-hq/synapse.git'
-LABEL org.opencontainers.image.licenses='AGPL-3.0-or-later'
+LABEL org.opencontainers.image.licenses='AGPL-3.0-or-later OR LicenseRef-Element-Commercial'

 # On the runtime image, /lib is a symlink to /usr/lib, so we need to copy the
 # libraries to the right place, else the `COPY` won't work.
--- a/docs/admin_api/media_admin_api.md
+++ b/docs/admin_api/media_admin_api.md
@@ -39,6 +39,40 @@ the use of the
 [List media uploaded by a user](user_admin_api.md#list-media-uploaded-by-a-user)
 Admin API.

+## Query a piece of media by ID
+
+This API returns information about a piece of local or cached remote media given the origin server name and media id. If
+information is requested for remote media which is not cached the endpoint will return 404. 
+
+Request:
+```http
+GET /_synapse/admin/v1/media/<origin>/<media_id>
+```
+
+The API returns a JSON body with media info like the following:
+
+Response:
+```json
+{
+  "media_info": {
+    "media_origin": "remote.com",
+    "user_id": null,
+    "media_id": "sdginwegWEG",
+    "media_type": "img/png",
+    "media_length": 67,
+    "upload_name":  "test.png",
+    "created_ts":  300,
+    "filesystem_id":  "wgeweg",
+    "url_cache": null,
+    "last_access_ts": 400,
+    "quarantined_by":  null,
+    "authenticated":  false,
+    "safe_from_quarantine": null,
+    "sha256": "ebf4f635a17d10d6eb46ba680b70142419aa3220f228001a036d311a22ee9d2a"
+  }
+}
+```
+
 # Quarantine media

 Quarantining media means that it is marked as inaccessible by users. It applies
--- a/docs/deprecation_policy.md
+++ b/docs/deprecation_policy.md
@@ -1,13 +1,11 @@
-Deprecation Policy for Platform Dependencies
-============================================
+# Deprecation Policy

-Synapse has a number of platform dependencies, including Python, Rust, 
-PostgreSQL and SQLite. This document outlines the policy towards which versions 
-we support, and when we drop support for versions in the future.
+Synapse has a number of **platform dependencies** (Python, Rust, PostgreSQL, and SQLite)
+and **application dependencies** (Python and Rust packages). This document outlines the
+policy towards which versions we support, and when we drop support for versions in the
+future.

-
-Policy
------
+## Platform Dependencies

 Synapse follows the upstream support life cycles for Python and PostgreSQL,
 i.e. when a version reaches End of Life Synapse will withdraw support for that
@@ -26,8 +24,8 @@ The oldest supported version of SQLite is the version
 [provided](https://packages.debian.org/bullseye/libsqlite3-0) by
 [Debian oldstable](https://wiki.debian.org/DebianOldStable).

-Context
-------
+
+### Context

 It is important for system admins to have a clear understanding of the platform
 requirements of Synapse and its deprecation policies so that they can
@@ -50,4 +48,42 @@ the ecosystem.
 On a similar note, SQLite does not generally have a concept of "supported 
 release"; bugfixes are published for the latest minor release only. We chose to
 track Debian's oldstable as this is relatively conservative, predictably updated
-and is consistent with the `.deb` packages released by Matrix.org.
+and is consistent with the `.deb` packages released by Matrix.org.
+
+
+## Application dependencies
+
+For application-level Python dependencies, we often specify loose version constraints
+(ex. `>=X.Y.Z`) to be forwards compatible with any new versions. Upper bounds (`<A.B.C`)
+are only added when necessary to prevent known incompatibilities.
+
+When selecting a minimum version, while we are mindful of the impact on downstream
+package maintainers, our primary focus is on the maintainability and progress of Synapse
+itself.
+
+For developers, a Python dependency version can be considered a "no-brainer" upgrade once it is
+available in both the latest [Debian Stable](https://packages.debian.org/stable/) and
+[Ubuntu LTS](https://launchpad.net/ubuntu) repositories. No need to burden yourself with
+extra scrutiny or consideration at this point.
+
+We aggressively update Rust dependencies. Since these are statically linked and managed
+entirely by `cargo` during build, they *can* pose no ongoing maintenance burden on others.
+This allows us to freely upgrade to leverage the latest ecosystem advancements assuming
+they don't have their own system-level dependencies.
+
+
+### Context
+
+Because Python dependencies can easily be managed in a virtual environment, we are less
+concerned about the criteria for selecting minimum versions. The only thing of concern
+is making sure we're not making it unnecessarily difficult for downstream package
+maintainers. Generally, this just means avoiding the bleeding edge for a few months.
+
+The situation for Rust dependencies is fundamentally different. For packagers, the
+concerns around Python dependency versions do not apply. The `cargo` tool handles
+downloading and building all libraries to satisfy dependencies, and these libraries are
+statically linked into the final binary. This means that from a packager's perspective,
+the Rust dependency versions are an internal build detail, not a runtime dependency to
+be managed on the target system. Consequently, we have even greater flexibility to
+upgrade Rust dependencies as needed for the project. Some distros (e.g. Fedora) do
+package Rust libraries, but this appears to be the outlier rather than the norm.
--- a/docs/log_contexts.md
+++ b/docs/log_contexts.md
@@ -143,8 +143,7 @@ cares about.
 The following sections describe pitfalls and helpful patterns when
 implementing these rules.

-Always await your awaitables
----------------------------
+## Always await your awaitables

 Whenever you get an awaitable back from a function, you should `await` on
 it as soon as possible. Do not pass go; do not do any logging; do not
@@ -203,6 +202,171 @@ async def sleep(seconds):
    return await context.make_deferred_yieldable(get_sleep_deferred(seconds))
 ```

+## Deferred callbacks
+
+When a deferred callback is called, it inherits the current logcontext. The deferred
+callback chain can resume a coroutine, which if following our logcontext rules, will
+restore its own logcontext, then run:
+
+ - until it yields control back to the reactor, setting the sentinel logcontext
+ - or until it finishes, restoring the logcontext it was started with (calling context)
+
+This behavior creates two specific issues:
+
+**Issue 1:** The first issue is that the callback may have reset the logcontext to the
+sentinel before returning. This means our calling function will continue with the
+sentinel logcontext instead of the logcontext it was started with (bad).
+
+**Issue 2:** The second issue is that the current logcontext that called the deferred
+callback could finish before the callback finishes (bad).
+
+In the following example, the deferred callback is called with the "main" logcontext and
+runs until we yield control back to the reactor in the `await` inside `clock.sleep(0)`.
+Since `clock.sleep(0)` follows our logcontext rules, it sets the logcontext to the
+sentinel before yielding control back to the reactor. Our `main` function continues with
+the sentinel logcontext (first bad thing) instead of the "main" logcontext. Then the
+`with LoggingContext("main")` block exits, finishing the "main" logcontext and yielding
+control back to the reactor again. Finally, later on when `clock.sleep(0)` completes,
+our `with LoggingContext("competing")` block exits, and restores the previous "main"
+logcontext which has already finished, resulting in `WARNING: Re-starting finished log
+context main` and leaking the `main` logcontext into the reactor which will then
+erronously be associated with the next task the reactor picks up.
+
+```python
+async def competing_callback():
+    # Since this is run with the "main" logcontext, when the "competing"
+    # logcontext exits, it will restore the previous "main" logcontext which has
+    # already finished and results in "WARNING: Re-starting finished log context main"
+    # and leaking the `main` logcontext into the reactor.
+    with LoggingContext("competing"):
+        await clock.sleep(0)
+
+def main():
+    with LoggingContext("main"):
+        d = defer.Deferred()
+        d.addCallback(lambda _: defer.ensureDeferred(competing_callback()))
+        # Call the callback within the "main" logcontext.
+        d.callback(None)
+        # Bad: This will be logged against sentinel logcontext
+        logger.debug("ugh")
+
+main()
+```
+
+**Solution 1:** We could of course fix this by following the general rule of "always
+await your awaitables":
+
+```python
+async def main():
+    with LoggingContext("main"):
+        d = defer.Deferred()
+        d.addCallback(lambda _: defer.ensureDeferred(competing_callback()))
+        d.callback(None)
+        # Wait for `d` to finish before continuing so the "main" logcontext is
+        # still active. This works because `d` already follows our logcontext
+        # rules. If not, we would also have to use `make_deferred_yieldable(d)`.
+        await d
+        # Good: This will be logged against the "main" logcontext
+        logger.debug("phew")
+``` 
+
+**Solution 2:** We could also fix this by surrounding the call to `d.callback` with a
+`PreserveLoggingContext`, which will reset the logcontext to the sentinel before calling
+the callback, and restore the "main" logcontext afterwards before continuing the `main`
+function. This solves the problem because when the "competing" logcontext exits, it will
+restore the sentinel logcontext which is never finished by its nature, so there is no
+warning and no leakage into the reactor.
+
+```python
+async def main():
+    with LoggingContext("main"):
+        d = defer.Deferred()
+        d.addCallback(lambda _: defer.ensureDeferred(competing_callback()))
+        d.callback(None)
+        with PreserveLoggingContext():
+            # Call the callback with the sentinel logcontext.
+            d.callback(None)
+        # Good: This will be logged against the "main" logcontext
+        logger.debug("phew")
+```
+
+**Solution 3:** But let's say you *do* want to run (fire-and-forget) the deferred
+callback in the current context without running into issues:
+
+We can solve the first issue by using `run_in_background(...)` to run the callback in
+the current logcontext and it handles the magic behind the scenes of a) restoring the
+calling logcontext before returning to the caller and b) resetting the logcontext to the
+sentinel after the deferred completes and we yield control back to the reactor to avoid
+leaking the logcontext into the reactor.
+
+To solve the second issue, we can extend the lifetime of the "main" logcontext by
+avoiding the `LoggingContext`'s context manager lifetime methods
+(`__enter__`/`__exit__`). We can still set "main" as the current logcontext by using
+`PreserveLoggingContext` and passing in the "main" logcontext.
+
+
+```python
+async def main():
+    main_context = LoggingContext("main")
+    with PreserveLoggingContext(main_context):
+        d = defer.Deferred()
+        d.addCallback(lambda _: defer.ensureDeferred(competing_callback()))
+        # The whole lambda will be run in the "main" logcontext. But we're using
+        # a trick to return the deferred `d` itself so that `run_in_background`
+        # will wait on that to complete and reset the logcontext to the sentinel
+        # when it does to avoid leaking the "main" logcontext into the reactor.
+        run_in_background(lambda: (d.callback(None), d)[1])
+        # Good: This will be logged against the "main" logcontext
+        logger.debug("phew")
+
+...
+
+# Wherever possible, it's best to finish the logcontext by calling `__exit__` at some
+# point. This allows us to catch bugs if we later try to erroneously restart a finished
+# logcontext.
+#
+# Since the "main" logcontext stores the `LoggingContext.previous_context` when it is
+# created, we can wrap this call in `PreserveLoggingContext()` to restore the correct
+# previous logcontext. Our goal is to have the calling context remain unchanged after
+# finishing the "main" logcontext.
+with PreserveLoggingContext():
+    # Finish the "main" logcontext
+    with main_context:
+        # Empty block - We're just trying to call `__exit__` on the "main" context
+        # manager to finish it. We can't call `__exit__` directly as the code expects us
+        # to `__enter__` before calling `__exit__` to `start`/`stop` things
+        # appropriately. And in any case, it's probably best not to call the internal
+        # methods directly.
+        pass
+```
+
+The same thing applies if you have some deferreds stored somewhere which you want to
+callback in the current logcontext.
+
+
+### Deferred errbacks and cancellations
+
+The same care should be taken when calling errbacks on deferreds. An errback and
+callback act the same in this regard (see section above).
+
+```python
+d = defer.Deferred()
+d.addErrback(some_other_function)
+d.errback(failure)
+```
+
+Additionally, cancellation is the same as directly calling the errback with a
+`twisted.internet.defer.CancelledError`:
+
+```python
+d = defer.Deferred()
+d.addErrback(some_other_function)
+d.cancel()
+```
+
+
+
+
 ## Fire-and-forget

 Sometimes you want to fire off a chain of execution, but not wait for
--- a/docs/modules/media_repository_callbacks.md
+++ b/docs/modules/media_repository_callbacks.md
@@ -64,3 +64,68 @@ If multiple modules implement this callback, they will be considered in order. I
 returns `True`, Synapse falls through to the next one. The value of the first callback that
 returns `False` will be used. If this happens, Synapse will not call any of the subsequent
 implementations of this callback.
+
+### `get_media_upload_limits_for_user`
+
+_First introduced in Synapse v1.139.0_
+
+```python
+async def get_media_upload_limits_for_user(user_id: str, size: int) -> Optional[List[synapse.module_api.MediaUploadLimit]]
+```
+
+**<span style="color:red">
+Caution: This callback is currently experimental. The method signature or behaviour
+may change without notice.
+</span>**
+
+Called when processing a request to store content in the media repository. This can be used to dynamically override
+the [media upload limits configuration](../usage/configuration/config_documentation.html#media_upload_limits).
+
+The arguments passed to this callback are:
+
+* `user_id`: The Matrix user ID of the user (e.g. `@alice:example.com`) making the request.
+
+If the callback returns a list then it will be used as the limits instead of those in the configuration (if any).
+
+If an empty list is returned then no limits are applied (**warning:** users will be able
+to upload as much data as they desire).
+
+If multiple modules implement this callback, they will be considered in order. If a
+callback returns `None`, Synapse falls through to the next one. The value of the first
+callback that does not return `None` will be used. If this happens, Synapse will not call
+any of the subsequent implementations of this callback.
+
+If there are no registered modules, or if all modules return `None`, then
+the default
+[media upload limits configuration](../usage/configuration/config_documentation.html#media_upload_limits)
+will be used.
+
+### `on_media_upload_limit_exceeded`
+
+_First introduced in Synapse v1.139.0_
+
+```python
+async def on_media_upload_limit_exceeded(user_id: str, limit: synapse.module_api.MediaUploadLimit, sent_bytes: int, attempted_bytes: int) -> None
+```
+
+**<span style="color:red">
+Caution: This callback is currently experimental. The method signature or behaviour
+may change without notice.
+</span>**
+
+Called when a user attempts to upload media that would exceed a
+[configured media upload limit](../usage/configuration/config_documentation.html#media_upload_limits).
+
+This callback will only be called on workers which handle
+[POST /_matrix/media/v3/upload](https://spec.matrix.org/v1.15/client-server-api/#post_matrixmediav3upload)
+requests.
+
+This could be used to inform the user that they have reached a media upload limit through
+some external method.
+
+The arguments passed to this callback are:
+
+* `user_id`: The Matrix user ID of the user (e.g. `@alice:example.com`) making the request.
+* `limit`: The `synapse.module_api.MediaUploadLimit` representing the limit that was reached.
+* `sent_bytes`: The number of bytes already sent during the period of the limit.
+* `attempted_bytes`: The number of bytes that the user attempted to send.
--- a/docs/modules/spam_checker_callbacks.md
+++ b/docs/modules/spam_checker_callbacks.md
@@ -195,12 +195,15 @@ _Changed in Synapse v1.132.0: Added the `room_config` argument. Callbacks that o
 async def user_may_create_room(user_id: str, room_config: synapse.module_api.JsonDict) -> Union["synapse.module_api.NOT_SPAM", "synapse.module_api.errors.Codes", bool]
 ```

-Called when processing a room creation request.
+Called when processing a room creation or room upgrade request.

 The arguments passed to this callback are:

 * `user_id`: The Matrix user ID of the user (e.g. `@alice:example.com`).
-* `room_config`: The contents of the body of a [/createRoom request](https://spec.matrix.org/latest/client-server-api/#post_matrixclientv3createroom) as a dictionary.
+* `room_config`: The contents of the body of the [`/createRoom` request](https://spec.matrix.org/v1.15/client-server-api/#post_matrixclientv3createroom) as a dictionary.
+  For a [room upgrade request](https://spec.matrix.org/v1.15/client-server-api/#post_matrixclientv3roomsroomidupgrade) it is a synthesised subset of what an equivalent
+  `/createRoom` request would have looked like. Specifically, it contains the `creation_content` (linking to the previous room) and `initial_state` (containing a
+  subset of the state of the previous room).

 The callback must return one of:
  - `synapse.module_api.NOT_SPAM`, to allow the operation. Other callbacks may still 
--- a/docs/openid.md
+++ b/docs/openid.md
@@ -186,6 +186,7 @@ oidc_providers:
 4. Note the slug of your application, Client ID and Client Secret.

 Note: RSA keys must be used for signing for Authentik, ECC keys do not work.
+Note: The provider must have a signing key set and must not use an encryption key.

 Synapse config:
 ```yaml
@@ -204,6 +205,12 @@ oidc_providers:
      config:
        localpart_template: "{{ user.preferred_username }}"
        display_name_template: "{{ user.preferred_username|capitalize }}" # TO BE FILLED: If your users have names in Authentik and you want those in Synapse, this should be replaced with user.name|capitalize.
+[...]
+jwt_config:
+    enabled: true
+    secret: "your client secret" # TO BE FILLED (same as `client_secret` above)
+    algorithm: "RS256"
+    # (...other fields)
 ```

 ### Dex
--- a/docs/upgrade.md
+++ b/docs/upgrade.md
@@ -117,6 +117,33 @@ each upgrade are complete before moving on to the next upgrade, to avoid
 stacking them up. You can monitor the currently running background updates with
 [the Admin API](usage/administration/admin_api/background_updates.html#status).

+# Upgrading to v1.139.0
+
+## `/register` requests from old application service implementations may break when using MAS
+
+Application Services that do not set `inhibit_login=true` when calling `POST
+/_matrix/client/v3/register` will receive the error
+`IO.ELEMENT.MSC4190.M_APPSERVICE_LOGIN_UNSUPPORTED` in response. This is a
+result of [MSC4190: Device management for application
+services](https://github.com/matrix-org/matrix-spec-proposals/pull/4190) which
+adds new endpoints for application services to create encryption-ready devices
+with other than `/login` or `/register` without `inhibit_login=true`.
+
+If an application service you use starts to fail with the mentioned error,
+ensure it is up to date. If it is, then kindly let the author know that they
+need to update their implementation to call `/register` with
+`inhibit_login=true`.
+
+# Upgrading to v1.138.2
+
+## Drop support for Ubuntu 24.10 Oracular Oriole, and add support for Ubuntu 25.04 Plucky Puffin
+
+Ubuntu 24.10 Oracular Oriole [has been end-of-life since 10 Jul
+2025](https://endoflife.date/ubuntu). This release drops support for Ubuntu
+24.10, and in its place adds support for Ubuntu 25.04 Plucky Puffin.
+
+This notice also applies to the v1.139.0 release.
+
 # Upgrading to v1.136.0

 ## Deprecate `run_as_background_process` exported as part of the module API interface in favor of `ModuleApi.run_as_background_process`
--- a/docs/usage/configuration/config_documentation.md
+++ b/docs/usage/configuration/config_documentation.md
@@ -2168,9 +2168,12 @@ max_upload_size: 60M
 ### `media_upload_limits`

 *(array)* A list of media upload limits defining how much data a given user can upload in a given time period.
+These limits are applied in addition to the `max_upload_size` limit above (which applies to individual uploads).

 An empty list means no limits are applied.

+These settings can be overridden using the `get_media_upload_limits_for_user` module API [callback](../../modules/media_repository_callbacks.md#get_media_upload_limits_for_user).
+
 Defaults to `[]`.

 Example configuration:
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 2.1.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 2.2.0 and should not be changed by hand.

 [[package]]
 name = "annotated-types"
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 [package.dependencies]
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-    {file = "pydantic-2.11.7.tar.gz", hash = "sha256:d989c3c6cb79469287b1569f7447a17848c998458d49ebe294e975b9baf0f0db"},
+    {file = "pydantic-2.11.9-py3-none-any.whl", hash = "sha256:c42dd626f5cfc1c6950ce6205ea58c93efa406da65f479dcb4029d5934857da2"},
+    {file = "pydantic-2.11.9.tar.gz", hash = "sha256:6b8ffda597a14812a7975c90b82a8a2e777d9257aba3453f973acd3c032a18e2"},
 ]

 [package.dependencies]
@@ -1908,14 +1966,14 @@ typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"

 [[package]]
 name = "pygithub"
-version = "2.7.0"
+version = "2.8.1"
 description = "Use the full Github API v3"
 optional = false
 python-versions = ">=3.8"
 groups = ["dev"]
 files = [
-    {file = "pygithub-2.7.0-py3-none-any.whl", hash = "sha256:40ecbfe26dc55cc34ab4b0ffa1d455e6f816ef9a2bc8d6f5ad18ce572f163700"},
-    {file = "pygithub-2.7.0.tar.gz", hash = "sha256:7cd6eafabb09b5369afba3586d86b1f1ad6f1326d2ff01bc47bb26615dce4cbb"},
+    {file = "pygithub-2.8.1-py3-none-any.whl", hash = "sha256:23a0a5bca93baef082e03411bf0ce27204c32be8bfa7abc92fe4a3e132936df0"},
+    {file = "pygithub-2.8.1.tar.gz", hash = "sha256:341b7c78521cb07324ff670afd1baa2bf5c286f8d9fd302c1798ba594a5400c9"},
 ]

 [package.dependencies]
@@ -2562,14 +2620,14 @@ type = ["importlib_metadata (>=7.0.2) ; python_version < \"3.10\"", "jaraco.deve

 [[package]]
 name = "setuptools-rust"
-version = "1.11.1"
+version = "1.12.0"
 description = "Setuptools Rust extension plugin"
 optional = false
 python-versions = ">=3.9"
 groups = ["main"]
 files = [
-    {file = "setuptools_rust-1.11.1-py3-none-any.whl", hash = "sha256:5eaaddaed268dc24a527ffa659ce56b22d3cf17b781247b779efd611031fe8ea"},
-    {file = "setuptools_rust-1.11.1.tar.gz", hash = "sha256:7dabc4392252ced314b8050d63276e05fdc5d32398fc7d3cce1f6a6ac35b76c0"},
+    {file = "setuptools_rust-1.12.0-py3-none-any.whl", hash = "sha256:7e7db90547f224a835b45f5ad90c983340828a345554a9a660bdb2de8605dcdd"},
+    {file = "setuptools_rust-1.12.0.tar.gz", hash = "sha256:d94a93f0c97751c17014565f07bdc324bee45d396cd1bba83d8e7af92b945f0c"},
 ]

 [package.dependencies]
@@ -2747,14 +2805,14 @@ files = [

 [[package]]
 name = "towncrier"
-version = "24.8.0"
+version = "25.8.0"
 description = "Building newsfiles for your project."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "towncrier-24.8.0-py3-none-any.whl", hash = "sha256:9343209592b839209cdf28c339ba45792fbfe9775b5f9c177462fd693e127d8d"},
-    {file = "towncrier-24.8.0.tar.gz", hash = "sha256:013423ee7eed102b2f393c287d22d95f66f1a3ea10a4baa82d298001a7f18af3"},
+    {file = "towncrier-25.8.0-py3-none-any.whl", hash = "sha256:b953d133d98f9aeae9084b56a3563fd2519dfc6ec33f61c9cd2c61ff243fb513"},
+    {file = "towncrier-25.8.0.tar.gz", hash = "sha256:eef16d29f831ad57abb3ae32a0565739866219f1ebfbdd297d32894eb9940eb1"},
 ]

 [package.dependencies]
@@ -2794,20 +2852,20 @@ docs = ["sphinx", "sphinx-rtd-theme"]

 [[package]]
 name = "twine"
-version = "6.1.0"
+version = "6.2.0"
 description = "Collection of utilities for publishing packages on PyPI"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "twine-6.1.0-py3-none-any.whl", hash = "sha256:a47f973caf122930bf0fbbf17f80b83bc1602c9ce393c7845f289a3001dc5384"},
-    {file = "twine-6.1.0.tar.gz", hash = "sha256:be324f6272eff91d07ee93f251edf232fc647935dd585ac003539b42404a8dbd"},
+    {file = "twine-6.2.0-py3-none-any.whl", hash = "sha256:418ebf08ccda9a8caaebe414433b0ba5e25eb5e4a927667122fbe8f829f985d8"},
+    {file = "twine-6.2.0.tar.gz", hash = "sha256:e5ed0d2fd70c9959770dce51c8f39c8945c574e18173a7b81802dab51b4b75cf"},
 ]

 [package.dependencies]
 id = "*"
 importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
-keyring = {version = ">=15.1", markers = "platform_machine != \"ppc64le\" and platform_machine != \"s390x\""}
+keyring = {version = ">=21.2.0", markers = "platform_machine != \"ppc64le\" and platform_machine != \"s390x\""}
 packaging = ">=24.0"
 readme-renderer = ">=35.0"
 requests = ">=2.20"
@@ -2817,7 +2875,7 @@ rich = ">=12.0.0"
 urllib3 = ">=1.26.0"

 [package.extras]
-keyring = ["keyring (>=15.1)"]
+keyring = ["keyring (>=21.2.0)"]

 [[package]]
 name = "twisted"
@@ -2971,14 +3029,14 @@ files = [

 [[package]]
 name = "types-psycopg2"
-version = "2.9.21.20250809"
+version = "2.9.21.20250915"
 description = "Typing stubs for psycopg2"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "types_psycopg2-2.9.21.20250809-py3-none-any.whl", hash = "sha256:59b7b0ed56dcae9efae62b8373497274fc1a0484bdc5135cdacbe5a8f44e1d7b"},
-    {file = "types_psycopg2-2.9.21.20250809.tar.gz", hash = "sha256:b7c2cbdcf7c0bd16240f59ba694347329b0463e43398de69784ea4dee45f3c6d"},
+    {file = "types_psycopg2-2.9.21.20250915-py3-none-any.whl", hash = "sha256:eefe5ccdc693fc086146e84c9ba437bb278efe1ef330b299a0cb71169dc6c55f"},
+    {file = "types_psycopg2-2.9.21.20250915.tar.gz", hash = "sha256:bfeb8f54c32490e7b5edc46215ab4163693192bc90407b4a023822de9239f5c8"},
 ]

 [[package]]
@@ -3011,14 +3069,14 @@ files = [

 [[package]]
 name = "types-requests"
-version = "2.32.4.20250611"
+version = "2.32.4.20250913"
 description = "Typing stubs for requests"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "types_requests-2.32.4.20250611-py3-none-any.whl", hash = "sha256:ad2fe5d3b0cb3c2c902c8815a70e7fb2302c4b8c1f77bdcd738192cdb3878072"},
-    {file = "types_requests-2.32.4.20250611.tar.gz", hash = "sha256:741c8777ed6425830bf51e54d6abe245f79b4dcb9019f1622b773463946bf826"},
+    {file = "types_requests-2.32.4.20250913-py3-none-any.whl", hash = "sha256:78c9c1fffebbe0fa487a418e0fa5252017e9c60d1a2da394077f1780f655d7e1"},
+    {file = "types_requests-2.32.4.20250913.tar.gz", hash = "sha256:abd6d4f9ce3a9383f269775a9835a4c24e5cd6b9f647d64f88aa4613c33def5d"},
 ]

 [package.dependencies]
@@ -3026,26 +3084,26 @@ urllib3 = ">=2"

 [[package]]
 name = "types-setuptools"
-version = "80.9.0.20250809"
+version = "80.9.0.20250822"
 description = "Typing stubs for setuptools"
 optional = false
 python-versions = ">=3.9"
 groups = ["dev"]
 files = [
-    {file = "types_setuptools-80.9.0.20250809-py3-none-any.whl", hash = "sha256:7c6539b4c7ac7b4ab4db2be66d8a58fb1e28affa3ee3834be48acafd94f5976a"},
-    {file = "types_setuptools-80.9.0.20250809.tar.gz", hash = "sha256:e986ba37ffde364073d76189e1d79d9928fb6f5278c7d07589cde353d0218864"},
+    {file = "types_setuptools-80.9.0.20250822-py3-none-any.whl", hash = "sha256:53bf881cb9d7e46ed12c76ef76c0aaf28cfe6211d3fab12e0b83620b1a8642c3"},
+    {file = "types_setuptools-80.9.0.20250822.tar.gz", hash = "sha256:070ea7716968ec67a84c7f7768d9952ff24d28b65b6594797a464f1b3066f965"},
 ]

 [[package]]
 name = "typing-extensions"
-version = "4.14.1"
+version = "4.15.0"
 description = "Backported and Experimental Type Hints for Python 3.9+"
 optional = false
 python-versions = ">=3.9"
 groups = ["main", "dev"]
 files = [
-    {file = "typing_extensions-4.14.1-py3-none-any.whl", hash = "sha256:d1e1e3b58374dc93031d6eda2420a48ea44a36c2b4766a4fdeb3710755731d76"},
-    {file = "typing_extensions-4.14.1.tar.gz", hash = "sha256:38b39f4aeeab64884ce9f74c94263ef78f3c22467c8724005483154c26648d36"},
+    {file = "typing_extensions-4.15.0-py3-none-any.whl", hash = "sha256:f0fa19c6845758ab08074a0cfa8b7aecb71c999ca73d62883bc25cc018c4e548"},
+    {file = "typing_extensions-4.15.0.tar.gz", hash = "sha256:0cea48d173cc12fa28ecabc3b837ea3cf6f38c6d1136f85cbaaf598984861466"},
 ]

 [[package]]
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -101,10 +101,10 @@ module-name = "synapse.synapse_rust"

 [tool.poetry]
 name = "matrix-synapse"
-version = "1.138.0"
+version = "1.139.0rc3"
 description = "Homeserver for the Matrix decentralised comms protocol"
 authors = ["Matrix.org Team and Contributors <packages@matrix.org>"]
-license = "AGPL-3.0-or-later"
+license = "AGPL-3.0-or-later OR LicenseRef-Element-Commercial"
 readme = "README.rst"
 repository = "https://github.com/element-hq/synapse"
 packages = [
--- a/schema/synapse-config.schema.yaml
+++ b/schema/synapse-config.schema.yaml
@@ -1,5 +1,5 @@
 $schema: https://element-hq.github.io/synapse/latest/schema/v1/meta.schema.json
-$id: https://element-hq.github.io/synapse/schema/synapse/v1.138/synapse-config.schema.json
+$id: https://element-hq.github.io/synapse/schema/synapse/v1.139/synapse-config.schema.json
 type: object
 properties:
  modules:
@@ -2415,8 +2415,15 @@ properties:
      A list of media upload limits defining how much data a given user can
      upload in a given time period.

+      These limits are applied in addition to the `max_upload_size` limit above
+      (which applies to individual uploads).
+

      An empty list means no limits are applied.
+
+
+      These settings can be overridden using the `get_media_upload_limits_for_user`
+      module API [callback](../../modules/media_repository_callbacks.md#get_media_upload_limits_for_user).
    default: []
    items:
      time_period:
--- a/scripts-dev/build_debian_packages.py
+++ b/scripts-dev/build_debian_packages.py
@@ -32,7 +32,7 @@ DISTS = (
    "debian:sid",  # (rolling distro, no EOL)
    "ubuntu:jammy",  # 22.04 LTS (EOL 2027-04) (our EOL forced by Python 3.10 is 2026-10-04)
    "ubuntu:noble",  # 24.04 LTS (EOL 2029-06)
-    "ubuntu:oracular",  # 24.10 (EOL 2025-07)
+    "ubuntu:plucky",  # 25.04 (EOL 2026-01)
    "debian:trixie",  # (EOL not specified yet)
 )

--- a/scripts-dev/mypy_synapse_plugin.py
+++ b/scripts-dev/mypy_synapse_plugin.py
@@ -68,6 +68,18 @@ PROMETHEUS_METRIC_MISSING_FROM_LIST_TO_CHECK = ErrorCode(
    category="per-homeserver-tenant-metrics",
 )

+PREFER_SYNAPSE_CLOCK_CALL_WHEN_RUNNING = ErrorCode(
+    "prefer-synapse-clock-call-when-running",
+    "`synapse.util.Clock.call_when_running` should be used instead of `reactor.callWhenRunning`",
+    category="synapse-reactor-clock",
+)
+
+PREFER_SYNAPSE_CLOCK_ADD_SYSTEM_EVENT_TRIGGER = ErrorCode(
+    "prefer-synapse-clock-add-system-event-trigger",
+    "`synapse.util.Clock.add_system_event_trigger` should be used instead of `reactor.addSystemEventTrigger`",
+    category="synapse-reactor-clock",
+)
+

 class Sentinel(enum.Enum):
    # defining a sentinel in this way allows mypy to correctly handle the
@@ -229,9 +241,77 @@ class SynapsePlugin(Plugin):
        ):
            return check_is_cacheable_wrapper

+        if fullname in (
+            "twisted.internet.interfaces.IReactorCore.callWhenRunning",
+            "synapse.types.ISynapseThreadlessReactor.callWhenRunning",
+            "synapse.types.ISynapseReactor.callWhenRunning",
+        ):
+            return check_call_when_running
+
+        if fullname in (
+            "twisted.internet.interfaces.IReactorCore.addSystemEventTrigger",
+            "synapse.types.ISynapseThreadlessReactor.addSystemEventTrigger",
+            "synapse.types.ISynapseReactor.addSystemEventTrigger",
+        ):
+            return check_add_system_event_trigger
+
        return None


+def check_call_when_running(ctx: MethodSigContext) -> CallableType:
+    """
+    Ensure that the `reactor.callWhenRunning` callsites aren't used.
+
+    `synapse.util.Clock.call_when_running` should always be used instead of
+    `reactor.callWhenRunning`.
+
+    Since `reactor.callWhenRunning` is a reactor callback, the callback will start out
+    with the sentinel logcontext. `synapse.util.Clock` starts a default logcontext as we
+    want to know which server the logs came from.
+
+    Args:
+        ctx: The `FunctionSigContext` from mypy.
+    """
+    signature: CallableType = ctx.default_signature
+    ctx.api.fail(
+        (
+            "Expected all `reactor.callWhenRunning` calls to use `synapse.util.Clock.call_when_running` instead. "
+            "This is so all Synapse code runs with a logcontext as we want to know which server the logs came from."
+        ),
+        ctx.context,
+        code=PREFER_SYNAPSE_CLOCK_CALL_WHEN_RUNNING,
+    )
+
+    return signature
+
+
+def check_add_system_event_trigger(ctx: MethodSigContext) -> CallableType:
+    """
+    Ensure that the `reactor.addSystemEventTrigger` callsites aren't used.
+
+    `synapse.util.Clock.add_system_event_trigger` should always be used instead of
+    `reactor.addSystemEventTrigger`.
+
+    Since `reactor.addSystemEventTrigger` is a reactor callback, the callback will start out
+    with the sentinel logcontext. `synapse.util.Clock` starts a default logcontext as we
+    want to know which server the logs came from.
+
+    Args:
+        ctx: The `FunctionSigContext` from mypy.
+    """
+    signature: CallableType = ctx.default_signature
+    ctx.api.fail(
+        (
+            "Expected all `reactor.addSystemEventTrigger` calls to use `synapse.util.Clock.add_system_event_trigger` instead. "
+            "This is so all Synapse code runs with a logcontext as we want to know which server the logs came from."
+        ),
+        ctx.context,
+        code=PREFER_SYNAPSE_CLOCK_ADD_SYSTEM_EVENT_TRIGGER,
+    )
+
+    return signature
+
+
 def analyze_prometheus_metric_classes(ctx: ClassDefContext) -> None:
    """
    Cross-check the list of Prometheus metric classes against the
--- a/scripts-dev/sign_json.py
+++ b/scripts-dev/sign_json.py
@@ -30,7 +30,7 @@ from signedjson.sign import sign_json

 from synapse.api.room_versions import KNOWN_ROOM_VERSIONS
 from synapse.crypto.event_signing import add_hashes_and_signatures
-from synapse.util import json_encoder
+from synapse.util.json import json_encoder


 def main() -> None:
--- a/synapse/_scripts/synapse_port_db.py
+++ b/synapse/_scripts/synapse_port_db.py
@@ -54,11 +54,11 @@ from twisted.internet import defer, reactor as reactor_
 from synapse.config.database import DatabaseConnectionConfig
 from synapse.config.homeserver import HomeServerConfig
 from synapse.logging.context import (
-    LoggingContext,
    make_deferred_yieldable,
    run_in_background,
 )
-from synapse.notifier import ReplicationNotifier
+from synapse.server import HomeServer
+from synapse.storage import DataStore
 from synapse.storage.database import DatabasePool, LoggingTransaction, make_conn
 from synapse.storage.databases.main import FilteringWorkerStore
 from synapse.storage.databases.main.account_data import AccountDataWorkerStore
@@ -98,8 +98,7 @@ from synapse.storage.databases.state.bg_updates import StateBackgroundUpdateStor
 from synapse.storage.engines import create_engine
 from synapse.storage.prepare_database import prepare_database
 from synapse.types import ISynapseReactor
-from synapse.util import SYNAPSE_VERSION, Clock
-from synapse.util.stringutils import random_string
+from synapse.util import SYNAPSE_VERSION

 # Cast safety: Twisted does some naughty magic which replaces the
 # twisted.internet.reactor module with a Reactor instance at runtime.
@@ -318,31 +317,16 @@ class Store(
        )


-class MockHomeserver:
+class MockHomeserver(HomeServer):
+    DATASTORE_CLASS = DataStore
+
    def __init__(self, config: HomeServerConfig):
-        self.clock = Clock(reactor)
-        self.config = config
-        self.hostname = config.server.server_name
-        self.version_string = SYNAPSE_VERSION
-        self.instance_id = random_string(5)
-
-    def get_clock(self) -> Clock:
-        return self.clock
-
-    def get_reactor(self) -> ISynapseReactor:
-        return reactor
-
-    def get_instance_id(self) -> str:
-        return self.instance_id
-
-    def get_instance_name(self) -> str:
-        return "master"
-
-    def should_send_federation(self) -> bool:
-        return False
-
-    def get_replication_notifier(self) -> ReplicationNotifier:
-        return ReplicationNotifier()
+        super().__init__(
+            hostname=config.server.server_name,
+            config=config,
+            reactor=reactor,
+            version_string=f"Synapse/{SYNAPSE_VERSION}",
+        )


 class Porter:
@@ -351,12 +335,12 @@ class Porter:
        sqlite_config: Dict[str, Any],
        progress: "Progress",
        batch_size: int,
-        hs_config: HomeServerConfig,
+        hs: HomeServer,
    ):
        self.sqlite_config = sqlite_config
        self.progress = progress
        self.batch_size = batch_size
-        self.hs_config = hs_config
+        self.hs = hs

    async def setup_table(self, table: str) -> Tuple[str, int, int, int, int]:
        if table in APPEND_ONLY_TABLES:
@@ -676,8 +660,7 @@ class Porter:

        engine = create_engine(db_config.config)

-        hs = MockHomeserver(self.hs_config)
-        server_name = hs.hostname
+        server_name = self.hs.hostname

        with make_conn(
            db_config=db_config,
@@ -688,16 +671,16 @@ class Porter:
            engine.check_database(
                db_conn, allow_outdated_version=allow_outdated_version
            )
-            prepare_database(db_conn, engine, config=self.hs_config)
+            prepare_database(db_conn, engine, config=self.hs.config)
            # Type safety: ignore that we're using Mock homeservers here.
            store = Store(
                DatabasePool(
-                    hs,  # type: ignore[arg-type]
+                    self.hs,
                    db_config,
                    engine,
                ),
                db_conn,
-                hs,  # type: ignore[arg-type]
+                self.hs,
            )
            db_conn.commit()

@@ -795,7 +778,7 @@ class Porter:
                return

            self.postgres_store = self.build_db_store(
-                self.hs_config.database.get_single_database()
+                self.hs.config.database.get_single_database()
            )

            await self.remove_ignored_background_updates_from_database()
@@ -1584,6 +1567,8 @@ def main() -> None:
    config = HomeServerConfig()
    config.parse_config_dict(hs_config, "", "")

+    hs = MockHomeserver(config)
+
    def start(stdscr: Optional["curses.window"] = None) -> None:
        progress: Progress
        if stdscr:
@@ -1595,15 +1580,14 @@ def main() -> None:
            sqlite_config=sqlite_config,
            progress=progress,
            batch_size=args.batch_size,
-            hs_config=config,
+            hs=hs,
        )

        @defer.inlineCallbacks
        def run() -> Generator["defer.Deferred[Any]", Any, None]:
-            with LoggingContext("synapse_port_db_run"):
-                yield defer.ensureDeferred(porter.run())
+            yield defer.ensureDeferred(porter.run())

-        reactor.callWhenRunning(run)
+        hs.get_clock().call_when_running(run)

        reactor.run()

--- a/synapse/_scripts/update_synapse_database.py
+++ b/synapse/_scripts/update_synapse_database.py
@@ -74,7 +74,7 @@ def run_background_updates(hs: HomeServer) -> None:
            )
        )

-    reactor.callWhenRunning(run)
+    hs.get_clock().call_when_running(run)

    reactor.run()

@@ -120,6 +120,13 @@ def main() -> None:
    # DB.
    hs.setup()

+    # This will cause all of the relevant storage classes to be instantiated and call
+    # `register_background_update_handler(...)`,
+    # `register_background_index_update(...)`,
+    # `register_background_validate_constraint(...)`, etc so they are available to use
+    # if we are asked to run those background updates.
+    hs.get_storage_controllers()
+
    if args.run_background_updates:
        run_background_updates(hs)

--- a/synapse/api/auth/base.py
+++ b/synapse/api/auth/base.py
@@ -354,12 +354,10 @@ class BaseAuth:
                effective_user_id, effective_device_id
            )
            if device_opt is None:
-                # For now, use 400 M_EXCLUSIVE if the device doesn't exist.
-                # This is an open thread of discussion on MSC3202 as of 2021-12-09.
                raise AuthError(
                    400,
                    f"Application service trying to use a device that doesn't exist ('{effective_device_id}' for {effective_user_id})",
-                    Codes.EXCLUSIVE,
+                    Codes.UNKNOWN_DEVICE,
                )

        return create_requester(
--- a/synapse/api/auth/mas.py
+++ b/synapse/api/auth/mas.py
@@ -43,9 +43,9 @@ from synapse.logging.opentracing import (
 from synapse.metrics import SERVER_NAME_LABEL
 from synapse.synapse_rust.http_client import HttpClient
 from synapse.types import JsonDict, Requester, UserID, create_requester
-from synapse.util import json_decoder
 from synapse.util.caches.cached_call import RetryOnExceptionCachedCall
 from synapse.util.caches.response_cache import ResponseCache, ResponseCacheContext
+from synapse.util.json import json_decoder

 from . import introspection_response_timer

--- a/synapse/api/auth/msc3861_delegated.py
+++ b/synapse/api/auth/msc3861_delegated.py
@@ -48,9 +48,9 @@ from synapse.logging.opentracing import (
 from synapse.metrics import SERVER_NAME_LABEL
 from synapse.synapse_rust.http_client import HttpClient
 from synapse.types import Requester, UserID, create_requester
-from synapse.util import json_decoder
 from synapse.util.caches.cached_call import RetryOnExceptionCachedCall
 from synapse.util.caches.response_cache import ResponseCache, ResponseCacheContext
+from synapse.util.json import json_decoder

 from . import introspection_response_timer

--- a/synapse/api/errors.py
+++ b/synapse/api/errors.py
@@ -30,7 +30,7 @@ from typing import Any, Dict, List, Optional, Union

 from twisted.web import http

-from synapse.util import json_decoder
+from synapse.util.json import json_decoder

 if typing.TYPE_CHECKING:
    from synapse.config.homeserver import HomeServerConfig
@@ -140,12 +140,18 @@ class Codes(str, Enum):
    # Part of MSC4155
    INVITE_BLOCKED = "ORG.MATRIX.MSC4155.M_INVITE_BLOCKED"

+    # Part of MSC4190
+    APPSERVICE_LOGIN_UNSUPPORTED = "IO.ELEMENT.MSC4190.M_APPSERVICE_LOGIN_UNSUPPORTED"
+
    # Part of MSC4306: Thread Subscriptions
    MSC4306_CONFLICTING_UNSUBSCRIPTION = (
        "IO.ELEMENT.MSC4306.M_CONFLICTING_UNSUBSCRIPTION"
    )
    MSC4306_NOT_IN_THREAD = "IO.ELEMENT.MSC4306.M_NOT_IN_THREAD"

+    # Part of MSC4326
+    UNKNOWN_DEVICE = "ORG.MATRIX.MSC4326.M_UNKNOWN_DEVICE"
+

 class CodeMessageException(RuntimeError):
    """An exception with integer code, a message string attributes and optional headers.
--- a/synapse/api/ratelimiting.py
+++ b/synapse/api/ratelimiting.py
@@ -26,7 +26,7 @@ from synapse.api.errors import LimitExceededError
 from synapse.config.ratelimiting import RatelimitSettings
 from synapse.storage.databases.main import DataStore
 from synapse.types import Requester
-from synapse.util import Clock
+from synapse.util.clock import Clock

 if TYPE_CHECKING:
    # To avoid circular imports:
--- a/synapse/api/urls.py
+++ b/synapse/api/urls.py
@@ -22,6 +22,7 @@
 """Contains the URL paths to prefix various aspects of the server with."""

 import hmac
+import urllib.parse
 from hashlib import sha256
 from typing import Optional
 from urllib.parse import urlencode, urljoin
@@ -96,11 +97,21 @@ class LoginSSORedirectURIBuilder:
        serialized_query_parameters = urlencode({"redirectUrl": client_redirect_url})

        if idp_id:
+            # Since this is a user-controlled string, make it safe to include in a URL path.
+            url_encoded_idp_id = urllib.parse.quote(
+                idp_id,
+                # Since this defaults to `safe="/"`, we have to override it. We're
+                # working with an individual URL path parameter so there shouldn't be
+                # any slashes in it which could change the request path.
+                safe="",
+                encoding="utf8",
+            )
+
            resultant_url = urljoin(
                # We have to add a trailing slash to the base URL to ensure that the
                # last path segment is not stripped away when joining with another path.
                f"{base_url}/",
-                f"{idp_id}?{serialized_query_parameters}",
+                f"{url_encoded_idp_id}?{serialized_query_parameters}",
            )
        else:
            resultant_url = f"{base_url}?{serialized_query_parameters}"
--- a/synapse/app/_base.py
+++ b/synapse/app/_base.py
@@ -72,8 +72,7 @@ from synapse.events.auto_accept_invites import InviteAutoAccepter
 from synapse.events.presence_router import load_legacy_presence_router
 from synapse.handlers.auth import load_legacy_password_auth_providers
 from synapse.http.site import SynapseSite
-from synapse.logging.context import PreserveLoggingContext
-from synapse.logging.opentracing import init_tracer
+from synapse.logging.context import LoggingContext, PreserveLoggingContext
 from synapse.metrics import install_gc_manager, register_threadpool
 from synapse.metrics.background_process_metrics import run_as_background_process
 from synapse.metrics.jemalloc import setup_jemalloc_stats
@@ -183,25 +182,23 @@ def start_reactor(
        if gc_thresholds:
            gc.set_threshold(*gc_thresholds)
        install_gc_manager()
-        run_command()

-    # make sure that we run the reactor with the sentinel log context,
-    # otherwise other PreserveLoggingContext instances will get confused
-    # and complain when they see the logcontext arbitrarily swapping
-    # between the sentinel and `run` logcontexts.
-    #
-    # We also need to drop the logcontext before forking if we're daemonizing,
-    # otherwise the cputime metrics get confused about the per-thread resource usage
-    # appearing to go backwards.
-    with PreserveLoggingContext():
-        if daemonize:
-            assert pid_file is not None
+        # Reset the logging context when we start the reactor (whenever we yield control
+        # to the reactor, the `sentinel` logging context needs to be set so we don't
+        # leak the current logging context and erroneously apply it to the next task the
+        # reactor event loop picks up)
+        with PreserveLoggingContext():
+            run_command()

-            if print_pidfile:
-                print(pid_file)
+    if daemonize:
+        assert pid_file is not None

-            daemonize_process(pid_file, logger)
-        run()
+        if print_pidfile:
+            print(pid_file)
+
+        daemonize_process(pid_file, logger)
+
+    run()


 def quit_with_error(error_string: str) -> NoReturn:
@@ -243,7 +240,7 @@ def redirect_stdio_to_logs() -> None:


 def register_start(
-    cb: Callable[P, Awaitable], *args: P.args, **kwargs: P.kwargs
+    hs: "HomeServer", cb: Callable[P, Awaitable], *args: P.args, **kwargs: P.kwargs
 ) -> None:
    """Register a callback with the reactor, to be called once it is running

@@ -280,7 +277,8 @@ def register_start(
            # on as normal.
            os._exit(1)

-    reactor.callWhenRunning(lambda: defer.ensureDeferred(wrapper()))
+    clock = hs.get_clock()
+    clock.call_when_running(lambda: defer.ensureDeferred(wrapper()))


 def listen_metrics(bind_addresses: StrCollection, port: int) -> None:
@@ -519,7 +517,9 @@ async def start(hs: "HomeServer") -> None:
    # numbers of DNS requests don't starve out other users of the threadpool.
    resolver_threadpool = ThreadPool(name="gai_resolver")
    resolver_threadpool.start()
-    reactor.addSystemEventTrigger("during", "shutdown", resolver_threadpool.stop)
+    hs.get_clock().add_system_event_trigger(
+        "during", "shutdown", resolver_threadpool.stop
+    )
    reactor.installNameResolver(
        GAIResolver(reactor, getThreadPool=lambda: resolver_threadpool)
    )
@@ -573,9 +573,6 @@ async def start(hs: "HomeServer") -> None:
    # Load the certificate from disk.
    refresh_certificate(hs)

-    # Start the tracer
-    init_tracer(hs)  # noqa
-
    # Instantiate the modules so they can register their web resources to the module API
    # before we start the listeners.
    module_api = hs.get_module_api()
@@ -601,18 +598,38 @@ async def start(hs: "HomeServer") -> None:
    hs.get_datastores().main.db_pool.start_profiling()
    hs.get_pusherpool().start()

+    def log_shutdown() -> None:
+        with LoggingContext(name="log_shutdown", server_name=server_name):
+            logger.info("Shutting down...")
+
    # Log when we start the shut down process.
-    hs.get_reactor().addSystemEventTrigger(
-        "before", "shutdown", logger.info, "Shutting down..."
-    )
+    hs.get_clock().add_system_event_trigger("before", "shutdown", log_shutdown)

    setup_sentry(hs)
    setup_sdnotify(hs)

-    # If background tasks are running on the main process or this is the worker in
-    # charge of them, start collecting the phone home stats and shared usage metrics.
+    # Register background tasks required by this server. This must be done
+    # somewhat manually due to the background tasks not being registered
+    # unless handlers are instantiated.
+    #
+    # While we could "start" these before the reactor runs, nothing will happen until
+    # the reactor is running, so we may as well do it here in `start`.
+    #
+    # Additionally, this means we also start them after we daemonize and fork the
+    # process which means we can avoid any potential problems with cputime metrics
+    # getting confused about the per-thread resource usage appearing to go backwards
+    # because we're comparing the resource usage (`rusage`) from the original process to
+    # the forked process.
    if hs.config.worker.run_background_tasks:
+        hs.start_background_tasks()
+
+        # TODO: This should be moved to same pattern we use for other background tasks:
+        # Add to `REQUIRED_ON_BACKGROUND_TASK_STARTUP` and rely on
+        # `start_background_tasks` to start it.
        await hs.get_common_usage_metrics_manager().setup()
+
+        # TODO: This feels like another pattern that should refactored as one of the
+        # `REQUIRED_ON_BACKGROUND_TASK_STARTUP`
        start_phone_stats_home(hs)

    # We now freeze all allocated objects in the hopes that (almost)
@@ -701,7 +718,7 @@ def setup_sdnotify(hs: "HomeServer") -> None:
    # we're not using systemd.
    sdnotify(b"READY=1\nMAINPID=%i" % (os.getpid(),))

-    hs.get_reactor().addSystemEventTrigger(
+    hs.get_clock().add_system_event_trigger(
        "before", "shutdown", sdnotify, b"STOPPING=1"
    )

--- a/synapse/app/admin_cmd.py
+++ b/synapse/app/admin_cmd.py
@@ -24,7 +24,7 @@ import logging
 import os
 import sys
 import tempfile
-from typing import List, Mapping, Optional, Sequence
+from typing import List, Mapping, Optional, Sequence, Tuple

 from twisted.internet import defer, task

@@ -256,7 +256,7 @@ class FileExfiltrationWriter(ExfiltrationWriter):
        return self.base_directory


-def start(config_options: List[str]) -> None:
+def load_config(argv_options: List[str]) -> Tuple[HomeServerConfig, argparse.Namespace]:
    parser = argparse.ArgumentParser(description="Synapse Admin Command")
    HomeServerConfig.add_arguments_to_parser(parser)

@@ -282,11 +282,15 @@ def start(config_options: List[str]) -> None:
    export_data_parser.set_defaults(func=export_data_command)

    try:
-        config, args = HomeServerConfig.load_config_with_parser(parser, config_options)
+        config, args = HomeServerConfig.load_config_with_parser(parser, argv_options)
    except ConfigError as e:
        sys.stderr.write("\n" + str(e) + "\n")
        sys.exit(1)

+    return config, args
+
+
+def start(config: HomeServerConfig, args: argparse.Namespace) -> None:
    if config.worker.worker_app is not None:
        assert config.worker.worker_app == "synapse.app.admin_cmd"

@@ -325,7 +329,7 @@ def start(config_options: List[str]) -> None:
    # command.

    async def run() -> None:
-        with LoggingContext("command"):
+        with LoggingContext(name="command", server_name=config.server.server_name):
            await _base.start(ss)
            await args.func(ss, args)

@@ -337,5 +341,6 @@ def start(config_options: List[str]) -> None:


 if __name__ == "__main__":
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config, args = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config, args)
--- a/synapse/app/appservice.py
+++ b/synapse/app/appservice.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/client_reader.py
+++ b/synapse/app/client_reader.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/event_creator.py
+++ b/synapse/app/event_creator.py
@@ -20,13 +20,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/federation_reader.py
+++ b/synapse/app/federation_reader.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/federation_sender.py
+++ b/synapse/app/federation_sender.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/frontend_proxy.py
+++ b/synapse/app/frontend_proxy.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/generic_worker.py
+++ b/synapse/app/generic_worker.py
@@ -49,6 +49,7 @@ from synapse.config.server import ListenerConfig, TCPListenerConfig
 from synapse.federation.transport.server import TransportLayerServer
 from synapse.http.server import JsonResource, OptionsResource
 from synapse.logging.context import LoggingContext
+from synapse.logging.opentracing import init_tracer
 from synapse.metrics import METRICS_PREFIX, MetricsResource, RegistryProxy
 from synapse.replication.http import REPLICATION_PREFIX, ReplicationRestResource
 from synapse.rest import ClientRestResource, admin
@@ -310,13 +311,26 @@ class GenericWorkerServer(HomeServer):
        self.get_replication_command_handler().start_replication(self)


-def start(config_options: List[str]) -> None:
+def load_config(argv_options: List[str]) -> HomeServerConfig:
+    """
+    Parse the commandline and config files (does not generate config)
+
+    Args:
+        argv_options: The options passed to Synapse. Usually `sys.argv[1:]`.
+
+    Returns:
+        Config object.
+    """
    try:
-        config = HomeServerConfig.load_config("Synapse worker", config_options)
+        config = HomeServerConfig.load_config("Synapse worker", argv_options)
    except ConfigError as e:
        sys.stderr.write("\n" + str(e) + "\n")
        sys.exit(1)

+    return config
+
+
+def start(config: HomeServerConfig) -> None:
    # For backwards compatibility let any of the old app names.
    assert config.worker.worker_app in (
        "synapse.app.appservice",
@@ -346,6 +360,9 @@ def start(config_options: List[str]) -> None:

    setup_logging(hs, config, use_worker_options=True)

+    # Start the tracer
+    init_tracer(hs)  # noqa
+
    try:
        hs.setup()

@@ -355,7 +372,10 @@ def start(config_options: List[str]) -> None:
    except Exception as e:
        handle_startup_exception(e)

-    register_start(_base.start, hs)
+    async def start() -> None:
+        await _base.start(hs)
+
+    register_start(hs, start)

    # redirect stdio to the logs, if configured.
    if not hs.config.logging.no_redirect_stdio:
@@ -365,8 +385,9 @@ def start(config_options: List[str]) -> None:


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/homeserver.py
+++ b/synapse/app/homeserver.py
@@ -29,7 +29,6 @@ from twisted.web.resource import EncodingResourceWrapper, Resource
 from twisted.web.server import GzipEncoderFactory

 import synapse
-import synapse.config.logger
 from synapse import events
 from synapse.api.urls import (
    CLIENT_API_PREFIX,
@@ -50,6 +49,7 @@ from synapse.app._base import (
 )
 from synapse.config._base import ConfigError, format_config_error
 from synapse.config.homeserver import HomeServerConfig
+from synapse.config.logger import setup_logging
 from synapse.config.server import ListenerConfig, TCPListenerConfig
 from synapse.federation.transport.server import TransportLayerServer
 from synapse.http.additional_resource import AdditionalResource
@@ -60,6 +60,7 @@ from synapse.http.server import (
    StaticResource,
 )
 from synapse.logging.context import LoggingContext
+from synapse.logging.opentracing import init_tracer
 from synapse.metrics import METRICS_PREFIX, MetricsResource, RegistryProxy
 from synapse.replication.http import REPLICATION_PREFIX, ReplicationRestResource
 from synapse.rest import ClientRestResource, admin
@@ -308,17 +309,21 @@ class SynapseHomeServer(HomeServer):
                logger.warning("Unrecognized listener type: %s", listener.type)


-def setup(config_options: List[str]) -> SynapseHomeServer:
+def load_or_generate_config(argv_options: List[str]) -> HomeServerConfig:
    """
+    Parse the commandline and config files
+
+    Supports generation of config files, so is used for the main homeserver app.
+
    Args:
-        config_options_options: The options passed to Synapse. Usually `sys.argv[1:]`.
+        argv_options: The options passed to Synapse. Usually `sys.argv[1:]`.

    Returns:
        A homeserver instance.
    """
    try:
        config = HomeServerConfig.load_or_generate_config(
-            "Synapse Homeserver", config_options
+            "Synapse Homeserver", argv_options
        )
    except ConfigError as e:
        sys.stderr.write("\n")
@@ -332,6 +337,20 @@ def setup(config_options: List[str]) -> SynapseHomeServer:
        # generating config files and shouldn't try to continue.
        sys.exit(0)

+    return config
+
+
+def setup(config: HomeServerConfig) -> SynapseHomeServer:
+    """
+    Create and setup a Synapse homeserver instance given a configuration.
+
+    Args:
+        config: The configuration for the homeserver.
+
+    Returns:
+        A homeserver instance.
+    """
+
    if config.worker.worker_app:
        raise ConfigError(
            "You have specified `worker_app` in the config but are attempting to start a non-worker "
@@ -367,7 +386,10 @@ def setup(config_options: List[str]) -> SynapseHomeServer:
        version_string=f"Synapse/{VERSION}",
    )

-    synapse.config.logger.setup_logging(hs, config, use_worker_options=False)
+    setup_logging(hs, config, use_worker_options=False)
+
+    # Start the tracer
+    init_tracer(hs)  # noqa

    logger.info("Setting up server")

@@ -387,7 +409,7 @@ def setup(config_options: List[str]) -> SynapseHomeServer:

        hs.get_datastores().main.db_pool.updates.start_doing_background_updates()

-    register_start(start)
+    register_start(hs, start)

    return hs

@@ -405,10 +427,12 @@ def run(hs: HomeServer) -> None:


 def main() -> None:
-    with LoggingContext("main"):
+    homeserver_config = load_or_generate_config(sys.argv[1:])
+
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
        # check base requirements
        check_requirements()
-        hs = setup(sys.argv[1:])
+        hs = setup(homeserver_config)

        # redirect stdio to the logs, if configured.
        if not hs.config.logging.no_redirect_stdio:
--- a/synapse/app/media_repository.py
+++ b/synapse/app/media_repository.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/pusher.py
+++ b/synapse/app/pusher.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/synchrotron.py
+++ b/synapse/app/synchrotron.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/app/user_dir.py
+++ b/synapse/app/user_dir.py
@@ -21,13 +21,14 @@

 import sys

-from synapse.app.generic_worker import start
+from synapse.app.generic_worker import load_config, start
 from synapse.util.logcontext import LoggingContext


 def main() -> None:
-    with LoggingContext("main"):
-        start(sys.argv[1:])
+    homeserver_config = load_config(sys.argv[1:])
+    with LoggingContext(name="main", server_name=homeserver_config.server.server_name):
+        start(homeserver_config)


 if __name__ == "__main__":
--- a/synapse/appservice/scheduler.py
+++ b/synapse/appservice/scheduler.py
@@ -84,7 +84,7 @@ from synapse.logging.context import run_in_background
 from synapse.metrics.background_process_metrics import run_as_background_process
 from synapse.storage.databases.main import DataStore
 from synapse.types import DeviceListUpdates, JsonMapping
-from synapse.util import Clock
+from synapse.util.clock import Clock

 if TYPE_CHECKING:
    from synapse.server import HomeServer
--- a/synapse/config/_base.py
+++ b/synapse/config/_base.py
@@ -22,6 +22,7 @@

 import argparse
 import errno
+import importlib.resources as importlib_resources
 import logging
 import os
 import re
@@ -46,7 +47,6 @@ from typing import (

 import attr
 import jinja2
-import pkg_resources
 import yaml

 from synapse.types import StrSequence
@@ -174,8 +174,8 @@ class Config:
        self.root = root_config

        # Get the path to the default Synapse template directory
-        self.default_template_dir = pkg_resources.resource_filename(
-            "synapse", "res/templates"
+        self.default_template_dir = str(
+            importlib_resources.files("synapse").joinpath("res").joinpath("templates")
        )

    @staticmethod
@@ -601,7 +601,7 @@ class RootConfig:

    @classmethod
    def load_config_with_parser(
-        cls: Type[TRootConfig], parser: argparse.ArgumentParser, argv: List[str]
+        cls: Type[TRootConfig], parser: argparse.ArgumentParser, argv_options: List[str]
    ) -> Tuple[TRootConfig, argparse.Namespace]:
        """Parse the commandline and config files with the given parser

@@ -611,14 +611,14 @@ class RootConfig:

        Args:
            parser
-            argv
+            argv_options: The options passed to Synapse. Usually `sys.argv[1:]`.

        Returns:
            Returns the parsed config object and the parsed argparse.Namespace
            object from parser.parse_args(..)`
        """

-        config_args = parser.parse_args(argv)
+        config_args = parser.parse_args(argv_options)

        config_files = find_config_files(search_paths=config_args.config_path)
        obj = cls(config_files)
@@ -646,12 +646,16 @@ class RootConfig:

    @classmethod
    def load_or_generate_config(
-        cls: Type[TRootConfig], description: str, argv: List[str]
+        cls: Type[TRootConfig], description: str, argv_options: List[str]
    ) -> Optional[TRootConfig]:
        """Parse the commandline and config files

        Supports generation of config files, so is used for the main homeserver app.

+        Args:
+            description: TODO
+            argv_options: The options passed to Synapse. Usually `sys.argv[1:]`.
+
        Returns:
            Config object, or None if --generate-config or --generate-keys was set
        """
@@ -747,7 +751,7 @@ class RootConfig:
        )

        cls.invoke_all_static("add_arguments", parser)
-        config_args = parser.parse_args(argv)
+        config_args = parser.parse_args(argv_options)

        config_files = find_config_files(search_paths=config_args.config_path)

--- a/synapse/config/experimental.py
+++ b/synapse/config/experimental.py
@@ -556,6 +556,9 @@ class ExperimentalConfig(Config):
        # MSC4133: Custom profile fields
        self.msc4133_enabled: bool = experimental.get("msc4133_enabled", False)

+        # MSC4169: Backwards-compatible redaction sending using `/send`
+        self.msc4169_enabled: bool = experimental.get("msc4169_enabled", False)
+
        # MSC4210: Remove legacy mentions
        self.msc4210_enabled: bool = experimental.get("msc4210_enabled", False)

@@ -590,5 +593,5 @@ class ExperimentalConfig(Config):
        self.msc4293_enabled: bool = experimental.get("msc4293_enabled", False)

        # MSC4306: Thread Subscriptions
-        # (and MSC4308: sliding sync extension for thread subscriptions)
+        # (and MSC4308: Thread Subscriptions extension to Sliding Sync)
        self.msc4306_enabled: bool = experimental.get("msc4306_enabled", False)
--- a/synapse/config/logger.py
+++ b/synapse/config/logger.py
@@ -40,7 +40,6 @@ from twisted.logger import (
 )

 from synapse.logging.context import LoggingContextFilter
-from synapse.logging.filter import MetadataFilter
 from synapse.synapse_rust import reset_logging_config
 from synapse.types import JsonDict

@@ -213,13 +212,11 @@ def _setup_stdlib_logging(
    # writes.

    log_context_filter = LoggingContextFilter()
-    log_metadata_filter = MetadataFilter({"server_name": config.server.server_name})
    old_factory = logging.getLogRecordFactory()

    def factory(*args: Any, **kwargs: Any) -> logging.LogRecord:
        record = old_factory(*args, **kwargs)
        log_context_filter.filter(record)
-        log_metadata_filter.filter(record)
        return record

    logging.setLogRecordFactory(factory)
--- a/synapse/config/oembed.py
+++ b/synapse/config/oembed.py
@@ -18,13 +18,13 @@
 # [This file includes modifications made by New Vector Limited]
 #
 #
+import importlib.resources as importlib_resources
 import json
 import re
 from typing import Any, Dict, Iterable, List, Optional, Pattern
 from urllib import parse as urlparse

 import attr
-import pkg_resources

 from synapse.types import JsonDict, StrSequence

@@ -64,7 +64,12 @@ class OembedConfig(Config):
        """
        # Whether to use the packaged providers.json file.
        if not oembed_config.get("disable_default_providers") or False:
-            with pkg_resources.resource_stream("synapse", "res/providers.json") as s:
+            path = (
+                importlib_resources.files("synapse")
+                .joinpath("res")
+                .joinpath("providers.json")
+            )
+            with path.open("r", encoding="utf-8") as s:
                providers = json.load(s)

            yield from self._parse_and_validate_provider(
--- a/synapse/config/repository.py
+++ b/synapse/config/repository.py
@@ -120,11 +120,19 @@ def parse_thumbnail_requirements(

@attr.s(auto_attribs=True, slots=True, frozen=True)
 class MediaUploadLimit:
-    """A limit on the amount of data a user can upload in a given time
-    period."""
+    """
+    Represents a limit on the amount of data a user can upload in a given time
+    period.
+
+    These can be configured through the `media_upload_limits` [config option](https://element-hq.github.io/synapse/latest/usage/configuration/config_documentation.html#media_upload_limits)
+    or via the `get_media_upload_limits_for_user` module API [callback](https://element-hq.github.io/synapse/latest/modules/media_repository_callbacks.html#get_media_upload_limits_for_user).
+    """

    max_bytes: int
+    """The maximum number of bytes that can be uploaded in the given time period."""
+
    time_period_ms: int
+    """The time period in milliseconds."""


 class ContentRepositoryConfig(Config):
--- a/synapse/crypto/keyring.py
+++ b/synapse/crypto/keyring.py
@@ -316,7 +316,7 @@ class Keyring:
            if key_result.valid_until_ts < verify_request.minimum_valid_until_ts:
                continue

-            await self._process_json(key_result.verify_key, verify_request)
+            await self.process_json(key_result.verify_key, verify_request)
            verified = True

        if not verified:
@@ -326,7 +326,7 @@ class Keyring:
                Codes.UNAUTHORIZED,
            )

-    async def _process_json(
+    async def process_json(
        self, verify_key: VerifyKey, verify_request: VerifyJsonRequest
    ) -> None:
        """Processes the `VerifyJsonRequest`. Raises if the signature can't be
--- a/synapse/events/auto_accept_invites.py
+++ b/synapse/events/auto_accept_invites.py
@@ -119,7 +119,6 @@ class InviteAutoAccepter:
            event.state_key,
            event.room_id,
            "join",
-            bg_start_span=False,
        )

        if is_direct_message:
--- a/synapse/events/builder.py
+++ b/synapse/events/builder.py
@@ -38,7 +38,7 @@ from synapse.storage.databases.main import DataStore
 from synapse.synapse_rust.events import EventInternalMetadata
 from synapse.types import EventID, JsonDict, StrCollection
 from synapse.types.state import StateFilter
-from synapse.util import Clock
+from synapse.util.clock import Clock
 from synapse.util.stringutils import random_string

 if TYPE_CHECKING:
--- a/synapse/federation/federation_client.py
+++ b/synapse/federation/federation_client.py
@@ -495,6 +495,43 @@ class FederationClient(FederationBase):
            )
            return RECOMMENDATION_OK

+    @trace
+    @tag_args
+    async def ask_policy_server_to_sign_event(
+        self, destination: str, pdu: EventBase, timeout: Optional[int] = None
+    ) -> Optional[JsonDict]:
+        """Requests that the destination server (typically a policy server)
+        sign the event as not spam.
+
+        If the policy server could not be contacted or the policy server
+        returned an error, this returns no signature.
+
+        Args:
+            destination: The remote homeserver to ask (a policy server)
+            pdu: The event to sign
+            timeout: How long to try (in ms) the destination for before
+                giving up. None indicates no timeout.
+        Returns:
+            The signature from the policy server, structured in the same was as the 'signatures'
+            JSON in the event e.g { "$policy_server_via_domain" : { "ed25519:policy_server": "signature_base64" }}
+        """
+        logger.debug(
+            "ask_policy_server_to_sign_event for event_id=%s from %s",
+            pdu.event_id,
+            destination,
+        )
+        try:
+            return await self.transport_layer.ask_policy_server_to_sign_event(
+                destination, pdu, timeout=timeout
+            )
+        except Exception as e:
+            logger.warning(
+                "ask_policy_server_to_sign_event: server %s responded with error: %s",
+                destination,
+                e,
+            )
+        return None
+
    @trace
    @tag_args
    async def get_pdu(
--- a/synapse/federation/federation_server.py
+++ b/synapse/federation/federation_server.py
@@ -159,7 +159,7 @@ class FederationServer(FederationBase):
        # with FederationHandlerRegistry.
        hs.get_directory_handler()

-        self._server_linearizer = Linearizer("fed_server")
+        self._server_linearizer = Linearizer(name="fed_server", clock=hs.get_clock())

        # origins that we are currently processing a transaction from.
        # a dict from origin to txn id.
--- a/synapse/federation/sender/init.py
+++ b/synapse/federation/sender/init.py
@@ -178,7 +178,7 @@ from synapse.types import (
    StrCollection,
    get_domain_from_id,
 )
-from synapse.util import Clock
+from synapse.util.clock import Clock
 from synapse.util.metrics import Measure
 from synapse.util.retryutils import filter_destinations_by_retry_limiter

--- a/synapse/federation/sender/transaction_manager.py
+++ b/synapse/federation/sender/transaction_manager.py
@@ -26,7 +26,7 @@ from synapse.api.constants import EduTypes
 from synapse.api.errors import HttpResponseException
 from synapse.events import EventBase
 from synapse.federation.persistence import TransactionActions
-from synapse.federation.units import Edu, Transaction
+from synapse.federation.units import Edu, Transaction, serialize_and_filter_pdus
 from synapse.logging.opentracing import (
    extract_text_map,
    set_tag,
@@ -36,7 +36,7 @@ from synapse.logging.opentracing import (
 )
 from synapse.metrics import SERVER_NAME_LABEL
 from synapse.types import JsonDict
-from synapse.util import json_decoder
+from synapse.util.json import json_decoder
 from synapse.util.metrics import measure_func

 if TYPE_CHECKING:
@@ -119,7 +119,7 @@ class TransactionManager:
                transaction_id=txn_id,
                origin=self.server_name,
                destination=destination,
-                pdus=[p.get_pdu_json() for p in pdus],
+                pdus=serialize_and_filter_pdus(pdus),
                edus=[edu.get_dict() for edu in edus],
            )

--- a/synapse/federation/transport/client.py
+++ b/synapse/federation/transport/client.py
@@ -170,6 +170,32 @@ class TransportLayerClient:
            timeout=timeout,
        )

+    async def ask_policy_server_to_sign_event(
+        self, destination: str, event: EventBase, timeout: Optional[int] = None
+    ) -> JsonDict:
+        """Requests that the destination server (typically a policy server)
+        sign the event as not spam.
+
+        If the policy server could not be contacted or the policy server
+        returned an error, this raises that error.
+
+        Args:
+            destination: The host name of the policy server / homeserver.
+            event: The event to sign.
+            timeout: How long to try (in ms) the destination for before giving up.
+                None indicates no timeout.
+        Returns:
+            The signature from the policy server, structured in the same was as the 'signatures'
+            JSON in the event e.g { "$policy_server_via_domain" : { "ed25519:policy_server": "signature_base64" }}
+        """
+        return await self.client.post_json(
+            destination=destination,
+            path="/_matrix/policy/unstable/org.matrix.msc4284/sign",
+            data=event.get_pdu_json(),
+            ignore_backoff=True,
+            timeout=timeout,
+        )
+
    async def backfill(
        self, destination: str, room_id: str, event_tuples: Collection[str], limit: int
    ) -> Optional[Union[JsonDict, list]]:
--- a/synapse/federation/transport/server/init.py
+++ b/synapse/federation/transport/server/init.py
@@ -135,7 +135,7 @@ class PublicRoomList(BaseFederationServlet):
        if not self.allow_access:
            raise FederationDeniedError(origin)

-        limit = parse_integer_from_args(query, "limit", 0)
+        limit: Optional[int] = parse_integer_from_args(query, "limit", 0)
        since_token = parse_string_from_args(query, "since", None)
        include_all_networks = parse_boolean_from_args(
            query, "include_all_networks", default=False
--- a/synapse/handlers/appservice.py
+++ b/synapse/handlers/appservice.py
@@ -98,7 +98,7 @@ class ApplicationServicesHandler:
        self.is_processing = False

        self._ephemeral_events_linearizer = Linearizer(
-            name="appservice_ephemeral_events"
+            name="appservice_ephemeral_events", clock=hs.get_clock()
        )

    def notify_interested_services(self, max_token: RoomStreamToken) -> None:
--- a/synapse/handlers/deactivate_account.py
+++ b/synapse/handlers/deactivate_account.py
@@ -62,7 +62,7 @@ class DeactivateAccountHandler:
        # Start the user parter loop so it can resume parting users from rooms where
        # it left off (if it has work left to do).
        if hs.config.worker.worker_app is None:
-            hs.get_reactor().callWhenRunning(self._start_user_parting)
+            hs.get_clock().call_when_running(self._start_user_parting)
        else:
            self._notify_account_deactivated_client = (
                ReplicationNotifyAccountDeactivatedServlet.make_client(hs)
--- a/synapse/handlers/delayed_events.py
+++ b/synapse/handlers/delayed_events.py
@@ -18,12 +18,15 @@ from typing import TYPE_CHECKING, List, Optional, Set, Tuple
 from twisted.internet.interfaces import IDelayedCall

 from synapse.api.constants import EventTypes
-from synapse.api.errors import ShadowBanError
+from synapse.api.errors import ShadowBanError, SynapseError
 from synapse.api.ratelimiting import Ratelimiter
 from synapse.config.workers import MAIN_PROCESS_INSTANCE_NAME
+from synapse.logging.context import make_deferred_yieldable
 from synapse.logging.opentracing import set_tag
 from synapse.metrics import SERVER_NAME_LABEL, event_processing_positions
-from synapse.metrics.background_process_metrics import run_as_background_process
+from synapse.metrics.background_process_metrics import (
+    run_as_background_process,
+)
 from synapse.replication.http.delayed_events import (
    ReplicationAddedDelayedEventRestServlet,
 )
@@ -45,6 +48,7 @@ from synapse.types import (
 )
 from synapse.util.events import generate_fake_event_id
 from synapse.util.metrics import Measure
+from synapse.util.sentinel import Sentinel

 if TYPE_CHECKING:
    from synapse.server import HomeServer
@@ -146,10 +150,37 @@ class DelayedEventsHandler:
        )

    async def _unsafe_process_new_event(self) -> None:
+        # We purposefully fetch the current max room stream ordering before
+        # doing anything else, as it could increment duing processing of state
+        # deltas. We want to avoid updating `delayed_events_stream_pos` past
+        # the stream ordering of the state deltas we've processed. Otherwise
+        # we'll leave gaps in our processing.
+        room_max_stream_ordering = self._store.get_room_max_stream_ordering()
+
+        # Check that there are actually any delayed events to process. If not, bail early.
+        delayed_events_count = await self._store.get_count_of_delayed_events()
+        if delayed_events_count == 0:
+            # There are no delayed events to process. Update the
+            # `delayed_events_stream_pos` to the latest `events` stream pos and
+            # exit early.
+            self._event_pos = room_max_stream_ordering
+
+            logger.debug(
+                "No delayed events to process. Updating `delayed_events_stream_pos` to max stream ordering (%s)",
+                room_max_stream_ordering,
+            )
+
+            await self._store.update_delayed_events_stream_pos(room_max_stream_ordering)
+
+            event_processing_positions.labels(
+                name="delayed_events", **{SERVER_NAME_LABEL: self.server_name}
+            ).set(room_max_stream_ordering)
+
+            return
+
        # If self._event_pos is None then means we haven't fetched it from the DB yet
        if self._event_pos is None:
            self._event_pos = await self._store.get_delayed_events_stream_pos()
-            room_max_stream_ordering = self._store.get_room_max_stream_ordering()
            if self._event_pos > room_max_stream_ordering:
                # apparently, we've processed more events than exist in the database!
                # this can happen if events are removed with history purge or similar.
@@ -167,7 +198,7 @@ class DelayedEventsHandler:
                self._clock, name="delayed_events_delta", server_name=self.server_name
            ):
                room_max_stream_ordering = self._store.get_room_max_stream_ordering()
-                if self._event_pos == room_max_stream_ordering:
+                if self._event_pos >= room_max_stream_ordering:
                    return

                logger.debug(
@@ -202,23 +233,81 @@ class DelayedEventsHandler:
        Process current state deltas to cancel other users' pending delayed events
        that target the same state.
        """
+        # Get the senders of each delta's state event (as sender information is
+        # not currently stored in the `current_state_deltas` table).
+        event_id_and_sender_dict = await self._store.get_senders_for_event_ids(
+            [delta.event_id for delta in deltas if delta.event_id is not None]
+        )
+
+        # Note: No need to batch as `get_current_state_deltas` will only ever
+        # return 100 rows at a time.
        for delta in deltas:
+            logger.debug(
+                "Handling: %r %r, %s", delta.event_type, delta.state_key, delta.event_id
+            )
+
+            # `delta.event_id` and `delta.sender` can be `None` in a few valid
+            # cases (see the docstring of
+            # `get_current_state_delta_membership_changes_for_user` for details).
            if delta.event_id is None:
-                logger.debug(
-                    "Not handling delta for deleted state: %r %r",
+                # TODO: Differentiate between this being caused by a state reset
+                # which removed a user from a room, or the homeserver
+                # purposefully having left the room. We can do so by checking
+                # whether there are any local memberships still left in the
+                # room. If so, then this is the result of a state reset.
+                #
+                # If it is a state reset, we should avoid cancelling new,
+                # delayed state events due to old state resurfacing. So we
+                # should skip and log a warning in this case.
+                #
+                # If the homeserver has left the room, then we should cancel all
+                # delayed state events intended for this room, as there is no
+                # need to try and send a delayed event into a room we've left.
+                logger.warning(
+                    "Skipping state delta (%r, %r) without corresponding event ID. "
+                    "This can happen if the homeserver has left the room (in which "
+                    "case this can be ignored), or if there has been a state reset "
+                    "which has caused the sender to be kicked out of the room",
                    delta.event_type,
                    delta.state_key,
                )
                continue

-            logger.debug(
-                "Handling: %r %r, %s", delta.event_type, delta.state_key, delta.event_id
+            sender_str = event_id_and_sender_dict.get(
+                delta.event_id, Sentinel.UNSET_SENTINEL
            )
-
-            event = await self._store.get_event(delta.event_id, allow_none=True)
-            if not event:
+            if sender_str is None:
+                # An event exists, but the `sender` field was "null" and Synapse
+                # incorrectly accepted the event. This is not expected.
+                logger.error(
+                    "Skipping state delta with event ID '%s' as 'sender' was None. "
+                    "This is unexpected - please report it as a bug!",
+                    delta.event_id,
+                )
+                continue
+            if sender_str is Sentinel.UNSET_SENTINEL:
+                # We have an event ID, but the event was not found in the
+                # datastore. This can happen if a room, or its history, is
+                # purged. State deltas related to the room are left behind, but
+                # the event no longer exists.
+                #
+                # As we cannot get the sender of this event, we can't calculate
+                # whether to cancel delayed events related to this one. So we skip.
+                logger.debug(
+                    "Skipping state delta with event ID '%s' - the room, or its history, may have been purged",
+                    delta.event_id,
+                )
+                continue
+
+            try:
+                sender = UserID.from_string(sender_str)
+            except SynapseError as e:
+                logger.error(
+                    "Skipping state delta with Matrix User ID '%s' that failed to parse: %s",
+                    sender_str,
+                    e,
+                )
                continue
-            sender = UserID.from_string(event.sender)

            next_send_ts = await self._store.cancel_delayed_state_events(
                room_id=delta.room_id,
@@ -328,7 +417,7 @@ class DelayedEventsHandler:
            requester,
            (requester.user.to_string(), requester.device_id),
        )
-        await self._initialized_from_db
+        await make_deferred_yieldable(self._initialized_from_db)

        next_send_ts = await self._store.cancel_delayed_event(
            delay_id=delay_id,
@@ -354,7 +443,7 @@ class DelayedEventsHandler:
            requester,
            (requester.user.to_string(), requester.device_id),
        )
-        await self._initialized_from_db
+        await make_deferred_yieldable(self._initialized_from_db)

        next_send_ts = await self._store.restart_delayed_event(
            delay_id=delay_id,
@@ -380,7 +469,7 @@ class DelayedEventsHandler:
        # Use standard request limiter for sending delayed events on-demand,
        # as an on-demand send is similar to sending a regular event.
        await self._request_ratelimiter.ratelimit(requester)
-        await self._initialized_from_db
+        await make_deferred_yieldable(self._initialized_from_db)

        event, next_send_ts = await self._store.process_target_delayed_event(
            delay_id=delay_id,
--- a/synapse/handlers/device.py
+++ b/synapse/handlers/device.py
@@ -1002,7 +1002,7 @@ class DeviceWriterHandler(DeviceHandler):
        # rolling-restarting Synapse.
        if self._is_main_device_list_writer:
            # On start up check if there are any updates pending.
-            hs.get_reactor().callWhenRunning(self._handle_new_device_update_async)
+            hs.get_clock().call_when_running(self._handle_new_device_update_async)
            self.device_list_updater = DeviceListUpdater(hs, self)
            hs.get_federation_registry().register_edu_handler(
                EduTypes.DEVICE_LIST_UPDATE,
@@ -1450,8 +1450,12 @@ class DeviceListUpdater(DeviceListWorkerUpdater):
        self.clock = hs.get_clock()  # nb must be called this for @measure_func
        self.device_handler = device_handler

-        self._remote_edu_linearizer = Linearizer(name="remote_device_list")
-        self._resync_linearizer = Linearizer(name="remote_device_resync")
+        self._remote_edu_linearizer = Linearizer(
+            name="remote_device_list", clock=self.clock
+        )
+        self._resync_linearizer = Linearizer(
+            name="remote_device_resync", clock=self.clock
+        )

        # user_id -> list of updates waiting to be handled.
        self._pending_updates: Dict[
--- a/Show More
+++ b/Show More
				`@@ -1 +0,0 @@`
				Remove obsolete and experimental `/sync/e2ee` endpoint.
				`@@ -0,0 +1 @@`
				Fix room upgrade `room_config` argument and documentation for `user_may_create_room` spam-checker callback.
				`@@ -0,0 +1 @@`
				`Update OEmbed providers to use 'X' instead of 'Twitter' in URL previews, following a rebrand. Contributed by @HammyHavoc.`
				`@@ -1 +0,0 @@`
				Fix `LaterGauge` metrics to collect from all servers.
				`@@ -1 +0,0 @@`
				`Configure Synapse to run MSC4306: Thread Subscriptions Complement tests.`
				`@@ -1 +0,0 @@`
				`Fix bug where we did not send invite revocations over federation.`
				`@@ -1 +0,0 @@`
				`Update push rules for experimental [MSC4306: Thread Subscriptions](https://github.com/matrix-org/matrix-doc/issues/4306) to follow newer draft.`
				`@@ -0,0 +1 @@`
				Fix `server_name` in logging context for multiple Synapse instances in one process.
				`@@ -1 +0,0 @@`
				Use the `Enum`'s value for the dictionary key when responding to an admin request for experimental features.
				`@@ -1 +0,0 @@`
				Suppress "Applying schema" log noise bulk when `SYNAPSE_LOG_TESTING` is set.